RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 BAGE3Q86Y29 109 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 BAGE2Q86Y30 109 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.58□□□□□ -1.68
CLK1-202ENST00000409403 BATF2Q8N1L9 274 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 FAM89BQ8N5H3 189 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 DEFB119Q8N690 84 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 TMEM252Q8N6L7 170 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 TEX45Q8NA69 505 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 OR5C1Q8NGR4 320 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 ZNF519Q8TB69 540 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 WFDC5Q8TCV5 224 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 RTN4IP1Q8WWV3 396 aaPredicted RBP4.58□□□□□ -1.68
CLK1-202ENST00000409403 SPSB1Q96BD6 273 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 ZNF48Q96MX3 618 aaPredicted RBP4.58□□□□□ -1.68
CLK1-202ENST00000409403 RASL10BQ96S79 203 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 ST6GALNAC5Q9BVH7 336 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 ZDHHC11Q9H8X9 412 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 ELOVL5Q9NYP7 299 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 C11orf21Q9P2W6 132 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 SMPXQ9UHP9 88 aa4.58□□□□□ -1.68
CLK1-202ENST00000409403 A0A0U1RQK1 487 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 A0A1W2PPV9 198 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 IGLC7A0M8Q6 106 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 A8MZ25 164 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 TRAPPC2LH3BP13 241 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 H3BSH0 61 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 M0QZ24 198 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 OR7C2O60412 319 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 ZNF737O75373 536 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 SRSF10O75494 262 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 ZNF823P16415 610 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 GCH1P30793 250 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 MDH2P40926 338 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 GPR1P46091 355 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 RPS15AP62244 130 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 PAX2Q02962 417 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 OR10J3Q5JRS4 329 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 Q5PR19 223 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 STUMQ69YW2 141 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 UNQ5815/PRO19632Q6UWF5 114 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 C12orf54Q6X4T0 127 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 ABHD12BQ7Z5M8 362 aaPredicted RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 VASH2Q86V25 355 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 MUC15Q8N387 334 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 LINC01555Q8NAE3 123 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 C16orf52Q8NHV5 167 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 NT5CQ8TCD5 201 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 C11orf40Q8WZ69 217 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 C8orf44Q96CB5 159 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 NUS1Q96E22 293 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 TSSK2Q96PF2 358 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 TSPAN32Q96QS1 320 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 NICN1Q9BSH3 213 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 VN1R1Q9GZP7 353 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 PARLQ9H300 379 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 BANF2Q9H503 90 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 C11orf1Q9H5F2 150 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 LYRM4Q9HD34 91 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 MMP25Q9NPA2 562 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 PEF1Q9UBV8 284 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 PLAGL1Q9UM63 463 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 B9D1Q9UPM9 204 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 PSG11Q9UQ72 335 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 PRSS37A4D1T9 235 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 FAM24AA6NFZ4 105 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 SDCBPO00560 298 aaPredicted RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 RBFOX2O43251 390 aaKnown RBP eCLIP4.57□□□□□ -1.68
CLK1-202ENST00000409403 PDE6DO43924 150 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 SERF1AO75920 110 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 S1PR2O95136 353 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 MT-ATP6P00846 226 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 CD55P08174 381 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 STAG3L3P0CL85 134 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 HOXB2P14652 356 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 ANOS1P23352 680 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 CEACAM3P40198 252 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 SLC6A8P48029 635 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 HINT1P49773 126 aaPredicted RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 DYNLT3P51808 116 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 KRTDAPP60985 99 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 HERV-K104P61576 105 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 RHOBP62745 196 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 HBG1P69891 147 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 HBG2P69892 147 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 RPL18Q07020 188 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 HLA-BQ31612 363 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 HES3Q5TGS1 186 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 FAM78BQ5VT40 261 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 MRPL54Q6P161 138 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 WDR73Q6P4I2 378 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 CBLN3Q6UW01 205 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 SFTPA2Q8IWL1 248 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 TMEM256Q8N2U0 113 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 C2orf73Q8N5S3 287 aaPredicted RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 OR5A2Q8NGI9 324 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 OR51T1Q8NGJ9 327 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 MRPL30Q8TCC3 161 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 NTN5Q8WTR8 489 aaPredicted RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 DAZLQ92904 295 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 BORCS7Q96B45 105 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms