RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 RCVRNP35243 200 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 PRSS8Q16651 343 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 RNASE12Q5GAN4 147 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 ZNF818PQ6ZRF7 136 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 LINC00482Q8N8I6 264 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 ZNF491Q8N8L2 437 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 MYOZ3Q8TDC0 251 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 C4orf3Q8WVX3 66 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 MIXL1Q9H2W2 232 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 VSIG4Q9Y279 399 aa13.99□□□□□ -0.17
PDLIM2-206ENST00000409141 H3BMQ9 156 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 TPPPO94811 219 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 SAA1P0DJI8 122 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 KIR2DS2P43631 304 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 BRWD1-AS2P59051 145 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 TSPAN5P62079 268 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 SSBP2P81877 361 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 KIAA0141Q14154 515 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 DEFB136Q30KP8 78 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 BEAN1Q3B7T3 259 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 OR5M8Q8NGP6 311 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 CASTOR1Q8WTX7 329 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 C15orf40Q8WUR7 153 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 BORCS5Q969J3 196 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 MOB3AQ96BX8 217 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 ISOC1Q96CN7 298 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 P2RX4Q99571 388 aa13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 CCDC59Q9P031 241 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-206ENST00000409141 GNRHRP30968 328 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 CATR1Q13166 79 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 TNXAQ16473 311 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 MRGPRG-AS1Q2M3A8 158 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 PYHIN1Q6K0P9 492 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 LAX1Q8IWV1 398 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 VKORC1L1Q8N0U8 176 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 SPAG16Q8N0X2 631 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 RCC1LQ96I51 464 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 MS4A10Q96PG2 267 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 OR5B12Q96R08 314 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 ABHD1Q96SE0 405 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 ZNF355PQ9NSJ1 428 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 KLK11Q9UBX7 282 aa13.97□□□□□ -0.17
PDLIM2-206ENST00000409141 CREBL2O60519 120 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 RAB25P57735 213 aa13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 OR5T1Q8NG75 326 aa13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 OR52I2Q8NH67 350 aa13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 FCAMRQ8WWV6 532 aa13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 PHB2Q99623 299 aa13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 ZNF430Q9H8G1 570 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 GNB4Q9HAV0 340 aa13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 CEPT1Q9Y6K0 416 aa13.96□□□□□ -0.17
PDLIM2-206ENST00000409141 MSGN1A6NI15 193 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 RAMP3O60896 148 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 ACTL6BO94805 426 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 HRASP01112 189 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 KPRPQ5T749 579 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 AADACL3Q5VUY0 350 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 MMD2Q8IY49 270 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 OR51H1Q8NH63 302 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 VSTM2AQ8TAG5 236 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 TMEM68Q96MH6 324 aa13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 C6orf62Q9GZU0 229 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-206ENST00000409141 CCDC160A6NGH7 325 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 M0QYG6 137 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 RBFOX2O43251 390 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 OR2A4O95047 310 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 DUS4LO95620 317 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 SSX9Q7RTT3 188 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 CMTM1Q8IZ96 169 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 POC5Q8NA72 575 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 OR11H1Q8NG94 326 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 DIRAS2Q96HU8 199 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 RHOVQ96L33 236 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 OR2A7Q96R45 310 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 AIFM2Q9BRQ8 373 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 SLA2Q9H6Q3 261 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 MTFP1Q9UDX5 166 aa13.94□□□□□ -0.18
PDLIM2-206ENST00000409141 I3L521 148 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 WIPF1O43516 503 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 PGLYRP1O75594 196 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 TRGV3P03979 118 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 IFNA6P05013 189 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 TPPP2P59282 170 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 RUNX1Q01196 453 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 ASPHD1Q5U4P2 390 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 LPCAT3Q6P1A2 487 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 OR1N2Q8NGR9 330 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 CD300LFQ8TDQ1 290 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 SRSF12Q8WXF0 261 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 FXYD6Q9H0Q3 95 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 TNCP24821 2201 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 GPR31O00270 319 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 MPPED1O15442 326 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 KBTBD11O94819 623 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 HPRT1P00492 218 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 CD3DP04234 171 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 RLN1P04808 185 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 APELAP0DMC3 54 aa13.93□□□□□ -0.18
PDLIM2-206ENST00000409141 RNASE10Q5GAN6 216 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms