RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 HMX3A6NHT5 357 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 IFNA21P01568 189 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 ERVK-16P61578 105 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 FCN2Q15485 313 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 POU2AF1Q16633 256 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 RNASE11Q8TAA1 199 aaKnown RBP17.66■□□□□ 0.42
EPCAM-202ENST00000405271 LSM10Q969L4 123 aaKnown RBP17.66■□□□□ 0.42
EPCAM-202ENST00000405271 HARBI1Q96MB7 349 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 RNF5Q99942 180 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 MGAT4CQ9UBM8 478 aa17.66■□□□□ 0.42
EPCAM-202ENST00000405271 MARCH11A6NNE9 402 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 FAM90A9PA6NNJ1 464 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 GOSR2O14653 212 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 SHOXO15266 292 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 HOXB5P09067 269 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 AANATQ16613 207 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 LYZL2Q7Z4W2 148 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 THNSL2Q86YJ6 484 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 FAM219AQ8IW50 185 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 OR5M8Q8NGP6 311 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 SEC22AQ96IW7 307 aa17.65■□□□□ 0.42
EPCAM-202ENST00000405271 ADAP1O75689 374 aa17.64■□□□□ 0.41
EPCAM-202ENST00000405271 IGKV1D-33P01593 117 aa17.64■□□□□ 0.41
EPCAM-202ENST00000405271 IGKV1-33P01594 117 aa17.64■□□□□ 0.41
EPCAM-202ENST00000405271 PAX6P26367 422 aa17.64■□□□□ 0.41
EPCAM-202ENST00000405271 OR11H7Q8NGC8 314 aa17.64■□□□□ 0.41
EPCAM-202ENST00000405271 OR2T10Q8NGZ9 312 aa17.64■□□□□ 0.41
EPCAM-202ENST00000405271 RRNAD1Q96FB5 475 aaKnown RBP17.64■□□□□ 0.41
EPCAM-202ENST00000405271 MXRA5Q9NR99 2828 aa17.64■□□□□ 0.41
EPCAM-202ENST00000405271 MOSP00540 346 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 KRASP01116 189 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 IGKV1-5P01602 117 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 SNRNP70P08621 437 aaKnown RBP17.63■□□□□ 0.41
EPCAM-202ENST00000405271 FAM157CP0CG43 387 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 G6PCP35575 357 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 LGALS7P47929 136 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 RPS16P62249 146 aaKnown RBP17.63■□□□□ 0.41
EPCAM-202ENST00000405271 EBI3Q14213 229 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 LRRC75BQ2VPJ9 315 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 NMSQ5H8A3 153 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 GGNBP1Q5YKI7 109 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 GSG1LQ6UXU4 331 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 DMBX1Q8NFW5 382 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 SPIN2AQ99865 258 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 SPIN2BQ9BPZ2 258 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 MMP24Q9Y5R2 645 aa17.63■□□□□ 0.41
EPCAM-202ENST00000405271 FBN1P35555 2871 aaKnown RBP17.63■□□□□ 0.41
EPCAM-202ENST00000405271 CCSO14618 274 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 FAM106CPP0CH98 169 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 C2orf68Q2NKX9 166 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 RHOVQ96L33 236 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 TSNAXQ99598 290 aaKnown RBP17.62■□□□□ 0.41
EPCAM-202ENST00000405271 SPDEFO95238 335 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 P0C879 139 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 SRP14P37108 136 aaKnown RBP17.62■□□□□ 0.41
EPCAM-202ENST00000405271 H2BFWTQ7Z2G1 175 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 VSTM2AQ8TAG5 236 aa17.62■□□□□ 0.41
EPCAM-202ENST00000405271 EAF1Q96JC9 268 aaPredicted RBP17.62■□□□□ 0.41
EPCAM-202ENST00000405271 SLC25A6P12236 298 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 CXCL3P19876 107 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 HES1Q14469 280 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 DEFB112Q30KQ8 113 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 VMA21Q3ZAQ7 101 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 THOC7Q6I9Y2 204 aaKnown RBP17.61■□□□□ 0.41
EPCAM-202ENST00000405271 IL17RELQ6ZVW7 336 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 BCL6BQ8N143 479 aaPredicted RBP17.61■□□□□ 0.41
EPCAM-202ENST00000405271 ASB13Q8WXK3 278 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 TMEM140Q9NV12 185 aa17.61■□□□□ 0.41
EPCAM-202ENST00000405271 SOX21Q9Y651 276 aaPredicted RBP17.61■□□□□ 0.41
EPCAM-202ENST00000405271 A0A0G2JRQ6 117 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 C5orf51A6NDU8 294 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 IGLV2-23P01705 113 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 SAA1P0DJI8 122 aaPredicted RBP17.6■□□□□ 0.41
EPCAM-202ENST00000405271 TMEM11P17152 192 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 SCGB2A2Q13296 93 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 OR4A47Q6IF82 309 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 Q8N6K4 173 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 SSX3Q99909 188 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 BET1LQ9NYM9 111 aa17.6■□□□□ 0.41
EPCAM-202ENST00000405271 FAM25EA8MYX2 175 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 H2BFSP57053 126 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 UBE2KP61086 200 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 SSX9Q7RTT3 188 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 VKORC1L1Q8N0U8 176 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 PUSL1Q8N0Z8 303 aaKnown RBP17.59■□□□□ 0.41
EPCAM-202ENST00000405271 GPR146Q96CH1 333 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 PDCD10Q9BUL8 212 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 ZNF436Q9C0F3 470 aaPredicted RBP17.59■□□□□ 0.41
EPCAM-202ENST00000405271 PRDM13Q9H4Q3 707 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 COA4Q9NYJ1 87 aa17.59■□□□□ 0.41
EPCAM-202ENST00000405271 COL6A5A8TX70 2615 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 A0A1B0GU03 582 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 C13orf42A0A1B0GVH6 325 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 MDFIC2A0A1B0GVS7 189 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 SRRM4A7MD48 611 aaKnown RBP17.58■□□□□ 0.41
EPCAM-202ENST00000405271 MPTX1A8MV57 137 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 CD24P25063 80 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 SMCO1Q147U7 214 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 OR8H1Q8NGG4 311 aa17.58■□□□□ 0.41
EPCAM-202ENST00000405271 OR4A5Q8NH83 315 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms