RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 TRIM16LQ309B1 348 aa26.51■■□□□ 1.83
CSNK1E-204ENST00000403904 C4orf46Q504U0 113 aa26.51■■□□□ 1.83
CSNK1E-204ENST00000403904 NPBQ8NG41 125 aa26.51■■□□□ 1.83
CSNK1E-204ENST00000403904 C1RLQ9NZP8 487 aa26.51■■□□□ 1.83
CSNK1E-204ENST00000403904 SLC25A17O43808 307 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 IGKV1-39P01597 117 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 IGKV1D-39P04432 117 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 TMEM187Q14656 261 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 C11orf88Q6PI97 169 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 Q8N9W7 124 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 ALX4Q9H161 411 aaPredicted RBP26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 RAB18Q9NP72 206 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 KIAA1456Q9P272 454 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 FAM181BA6NEQ2 426 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 SFT2D2O95562 160 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 RPA2P15927 270 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 SSX9Q7RTT3 188 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 RHOVQ96L33 236 aa26.5■■□□□ 1.83
CSNK1E-204ENST00000403904 NDUFA3O95167 84 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 HRASP01112 189 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 HLA-AP01891 365 aaKnown RBP26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 AMY1AP04745 511 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 ANXA3P12429 323 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 MECP2P51608 486 aaKnown RBP26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 FAM71E2Q8N5Q1 922 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 C5orf56Q8N8D9 126 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 CASTOR1Q8WTX7 329 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 R3HDM4Q96D70 268 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 MARVELD1Q9BSK0 173 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 FBXL15Q9H469 300 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 COMMD9Q9P000 198 aa26.49■■□□□ 1.83
CSNK1E-204ENST00000403904 C9orf170A2RU37 121 aa26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 INMT-MINDY4F8WBC2 141 aa26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 RRHO14718 337 aa26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 KRASP01116 189 aa26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 NQO2P16083 231 aa26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 DHRS2Q13268 280 aa26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 LHFPL5Q8TAF8 219 aa26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 METTL1Q9UBP6 276 aaKnown RBP26.48■■□□□ 1.83
CSNK1E-204ENST00000403904 SH2D7A6NKC9 451 aaPredicted RBP26.47■■□□□ 1.83
CSNK1E-204ENST00000403904 FGF16O43320 207 aa26.47■■□□□ 1.83
CSNK1E-204ENST00000403904 CDS2O95674 445 aa26.47■■□□□ 1.83
CSNK1E-204ENST00000403904 SAA1P0DJI8 122 aaPredicted RBP26.47■■□□□ 1.83
CSNK1E-204ENST00000403904 G6PCP35575 357 aa26.47■■□□□ 1.83
CSNK1E-204ENST00000403904 OR52B4Q8NGK2 314 aa26.47■■□□□ 1.83
CSNK1E-204ENST00000403904 TPSG1Q9NRR2 321 aa26.47■■□□□ 1.83
CSNK1E-204ENST00000403904 MARCH11A6NNE9 402 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 SPDEFO95238 335 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 UBE2KP61086 200 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 PLGLAQ15195 96 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 C5orf64Q2M2E5 130 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 VMA21Q3ZAQ7 101 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 LYG2Q86SG7 212 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 DMBX1Q8NFW5 382 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 ZFAND2BQ8WV99 257 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 TRIM77I1YAP6 450 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 M0QZK8 103 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 BLCAPP62952 87 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 RASL11BQ9BPW5 248 aa26.46■■□□□ 1.83
CSNK1E-204ENST00000403904 ANKRD55Q3KP44 614 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 TMEM268Q5VZI3 342 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 PRIMA1Q86XR5 153 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 ZNF695Q8IW36 515 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 TAF15Q92804 592 aaKnown RBP eCLIP26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 SEC22AQ96IW7 307 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 TMEM56Q96MV1 263 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 SEC22CQ9BRL7 303 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 AIFM2Q9BRQ8 373 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 SIGLEC9Q9Y336 463 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 TMEM56-RWDD3S4R434 201 aa26.45■■□□□ 1.82
CSNK1E-204ENST00000403904 PLXNB1O43157 2135 aa26.44■■□□□ 1.82
CSNK1E-204ENST00000403904 CRYGBP07316 175 aa26.44■■□□□ 1.82
CSNK1E-204ENST00000403904 RAG2P55895 527 aa26.44■■□□□ 1.82
CSNK1E-204ENST00000403904 ERVK-16P61578 105 aa26.44■■□□□ 1.82
CSNK1E-204ENST00000403904 SELENOHQ8IZQ5 122 aaKnown RBP26.44■■□□□ 1.82
CSNK1E-204ENST00000403904 CLCC1Q96S66 551 aa26.44■■□□□ 1.82
CSNK1E-204ENST00000403904 POU2AF1Q16633 256 aa26.43■■□□□ 1.82
CSNK1E-204ENST00000403904 OR4A47Q6IF82 309 aa26.43■■□□□ 1.82
CSNK1E-204ENST00000403904 TEX45Q8NA69 505 aa26.43■■□□□ 1.82
CSNK1E-204ENST00000403904 RBPMSQ93062 196 aaKnown RBP26.43■■□□□ 1.82
CSNK1E-204ENST00000403904 OXA1LQ15070 435 aa26.42■■□□□ 1.82
CSNK1E-204ENST00000403904 PUSL1Q8N0Z8 303 aaKnown RBP26.42■■□□□ 1.82
CSNK1E-204ENST00000403904 NPFFR1Q9GZQ6 430 aa26.42■■□□□ 1.82
CSNK1E-204ENST00000403904 TMEM140Q9NV12 185 aa26.42■■□□□ 1.82
CSNK1E-204ENST00000403904 FCN1O00602 326 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 OR2A4O95047 310 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 IGKV1-5P01602 117 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 PJVKQ0ZLH3 352 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 LIN54Q6MZP7 749 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 Q6ZS46 218 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 PPP1R27Q86WC6 154 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 LGI3Q8N145 548 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 OR2A7Q96R45 310 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 C2CD3Q4AC94 2353 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 TNCP24821 2201 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 DUS4LO95620 317 aaKnown RBP26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 CRYBA1P05813 215 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 AKR1C2P52895 323 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 SRPXP78539 464 aa26.41■■□□□ 1.82
CSNK1E-204ENST00000403904 VSTM2AQ8TAG5 236 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms