RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 PRAMEF5Q5TYX0 476 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 R3HDM4Q96D70 268 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 FAM122AQ96E09 287 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 RELNP78509 3460 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 RBFOX2O43251 390 aaKnown RBP eCLIP9.98□□□□□ -0.813e-6■■□□□ 13
RBM39-206ENST00000403542 ARL14EPLP0DKL9 152 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 CD82P27701 267 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 CD1BP29016 333 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 FOXF2Q12947 444 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 VWA1Q6PCB0 445 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 VHLLQ6RSH7 139 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 C11orf53Q8IXP5 236 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 Q8IYB0 196 aa9.98□□□□□ -0.81
RBM39-206ENST00000403542 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
RBM39-206ENST00000403542 C15orf62A8K5M9 175 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 M0R1X1 148 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 SELLP14151 372 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 LINC01551Q86U37 167 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 ZNRF1Q8ND25 227 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 SGMS2Q8NHU3 365 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 KLF13Q9Y2Y9 288 aaPredicted RBP9.97□□□□□ -0.81
RBM39-206ENST00000403542 SVEP1Q4LDE5 3571 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 TRBV20OR9-2A0A075B6H5 130 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 SCO2A0A1W2PP80 73 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 OOEPA6NGQ2 149 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 TMEM250H0YL14 139 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 SLC17A3O00476 420 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 PROP1O75360 226 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 ACTL6BO94805 426 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 GCH1P30793 250 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 GPR12P47775 334 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 SSX2Q16385 188 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 ZNF766Q5HY98 468 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 SPATA31B1PQ5VZV4 182 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 WDR82Q6UXN9 313 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 TGIF2LXQ8IUE1 241 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 CBLN4Q9NTU7 201 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 TRAPPC1Q9Y5R8 145 aa9.97□□□□□ -0.81
RBM39-206ENST00000403542 CLDN14O95500 239 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 CD46P15529 392 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 SOX8P57073 446 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 PDLIM3Q53GG5 364 aaPredicted RBP9.96□□□□□ -0.81
RBM39-206ENST00000403542 ACP7Q6ZNF0 438 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 UBALD2Q8IYN6 164 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 OR2Z1Q8NG97 314 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 FAM90A26D6RGX4 464 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 EREGO14944 169 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 SPRNQ5BIV9 151 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 LRRC29Q8WV35 223 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 SPRY4Q9C004 299 aa9.96□□□□□ -0.81
RBM39-206ENST00000403542 YLPM1P49750 1951 aaKnown RBP9.96□□□□□ -0.82
RBM39-206ENST00000403542 P0C879 139 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 G0S2P27469 103 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 CCL11P51671 97 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 SLC35B1P78383 322 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 PAX5Q02548 391 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 ACOT6Q3I5F7 207 aaPredicted RBP9.96□□□□□ -0.82
RBM39-206ENST00000403542 CD177Q8N6Q3 437 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 OR4A16Q8NH70 328 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 Q8TCH9 128 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 TMEM170AQ8WVE7 144 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 SPOCK3Q9BQ16 436 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 AGMATQ9BSE5 352 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 MS4A5Q9H3V2 200 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 MANBALQ9NQG1 85 aa9.96□□□□□ -0.82
RBM39-206ENST00000403542 A8MWP6 167 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 DVL1O14640 695 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 FOXH1O75593 365 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 MBP02144 154 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 CBLN1P23435 193 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 HOXC12P31275 282 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 CYB5R2Q6BCY4 276 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 TEX38Q6PEX7 206 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 TIMM9Q9Y5J7 89 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 PIGBOS1A0A0B4J2F0 54 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 ZNF705FA8MVS1 300 aaPredicted RBP9.95□□□□□ -0.82
RBM39-206ENST00000403542 C17orf112F2Z3M2 114 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 ZNF705DP0CH99 300 aaPredicted RBP9.95□□□□□ -0.82
RBM39-206ENST00000403542 ZNF705BP0CI00 300 aaPredicted RBP9.95□□□□□ -0.82
RBM39-206ENST00000403542 CNN1P51911 297 aaKnown RBP9.95□□□□□ -0.82
RBM39-206ENST00000403542 ZNF134P52741 427 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 Q8N7P7 452 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 PYGO2Q9BRQ0 406 aa9.95□□□□□ -0.82
RBM39-206ENST00000403542 SEPSECSQ9HD40 501 aaKnown RBP9.95□□□□□ -0.82
RBM39-206ENST00000403542 TET2Q6N021 2002 aaPredicted RBP9.94□□□□□ -0.82
RBM39-206ENST00000403542 SLC31A2O15432 143 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 ATP6V1FQ16864 119 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 HLA-DRB5Q30154 266 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 KCNIP4Q6PIL6 250 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 C1orf229Q6ZS94 237 aaPredicted RBP9.94□□□□□ -0.82
RBM39-206ENST00000403542 MOB3BQ86TA1 216 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 MDS2Q8NDY4 140 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 DEFB108BQ8NET1 73 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 TMEM18Q96B42 140 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 DDA1Q9BW61 102 aa9.94□□□□□ -0.82
RBM39-206ENST00000403542 ZNRD1Q9P1U0 126 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms