RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 GRPP07492 148 aa16.53■□□□□ 0.24
CCDC47-202ENST00000403162 CCKARP32238 428 aa16.53■□□□□ 0.24
CCDC47-202ENST00000403162 LINC01551Q86U37 167 aa16.53■□□□□ 0.24
CCDC47-202ENST00000403162 RAB1CQ92928 201 aa16.53■□□□□ 0.24
CCDC47-202ENST00000403162 BTF3L4Q96K17 158 aa16.53■□□□□ 0.24
CCDC47-202ENST00000403162 USF3Q68DE3 2245 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 SOX15O60248 233 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 RNF224P0DH78 156 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 SLC10A1Q14973 349 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 FAM53AQ6NSI3 398 aaPredicted RBP16.52■□□□□ 0.24
CCDC47-202ENST00000403162 RBMXL3Q8N7X1 1067 aaKnown RBP16.52■□□□□ 0.24
CCDC47-202ENST00000403162 WDR31Q8NA23 367 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 SLC25A40Q8TBP6 338 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 IMMP2LQ96T52 175 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 DEFB127Q9H1M4 99 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 TP53TG5Q9Y2B4 290 aa16.52■□□□□ 0.24
CCDC47-202ENST00000403162 PTPRQQ9UMZ3 2332 aa16.52■□□□□ 0.23
CCDC47-202ENST00000403162 C15orf62A8K5M9 175 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 SELEP16581 610 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 BTNL3Q6UXE8 466 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 Q6ZS92 163 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 WDR83OSQ9Y284 106 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 ANKRD11Q6UB99 2663 aaPredicted RBP16.51■□□□□ 0.23
CCDC47-202ENST00000403162 IGHV3-64DA0A0J9YX35 117 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 CNN1P51911 297 aaKnown RBP16.51■□□□□ 0.23
CCDC47-202ENST00000403162 RPS16P62249 146 aaKnown RBP16.51■□□□□ 0.23
CCDC47-202ENST00000403162 AESQ08117 197 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 PSG7Q13046 419 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 TMEM144Q7Z5S9 345 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 COQ2Q96H96 371 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 KCNIP2Q9NS61 270 aa16.51■□□□□ 0.23
CCDC47-202ENST00000403162 DOCK11Q5JSL3 2073 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 RBMXL2O75526 392 aaKnown RBP16.5■□□□□ 0.23
CCDC47-202ENST00000403162 IL3RAP26951 378 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 RPL15P61313 204 aaKnown RBP16.5■□□□□ 0.23
CCDC47-202ENST00000403162 GNB1P62873 340 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 PRR7Q8TB68 274 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 HSD17B10Q99714 261 aaKnown RBP16.5■□□□□ 0.23
CCDC47-202ENST00000403162 LINC00473A8K010 186 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 ZNF705GA8MUZ8 300 aaPredicted RBP16.5■□□□□ 0.23
CCDC47-202ENST00000403162 FAM87AP0C7U9 286 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 DEFA4P12838 97 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 CHRNA7P36544 502 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 GBGT1Q8N5D6 347 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 MISP3Q96FF7 219 aa16.5■□□□□ 0.23
CCDC47-202ENST00000403162 ZNF71Q9NQZ8 489 aaPredicted RBP16.5■□□□□ 0.23
CCDC47-202ENST00000403162 MARCH11A6NNE9 402 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 F6UZH7 168 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 NDUFB7P17568 137 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 AARDQ4LEZ3 155 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 FAM78BQ5VT40 261 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 MRGPRDQ8TDS7 321 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 ZDHHC11Q9H8X9 412 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 GTF3C1Q12789 2109 aa16.49■□□□□ 0.23
CCDC47-202ENST00000403162 TMEM8BA6NDV4 472 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 WNT9BO14905 357 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 CD1BP29016 333 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 SPINK9Q5DT21 86 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 C11orf53Q8IXP5 236 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 LURAP1Q96LR2 239 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 GABRA2P47869 451 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 ATP5G3P48201 142 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 UBE2NP61088 152 aaKnown RBP16.48■□□□□ 0.23
CCDC47-202ENST00000403162 FOXL1Q12952 345 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 SSX2Q16385 188 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 PRSS8Q16651 343 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 IQCJQ1A5X6 159 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 ACP7Q6ZNF0 438 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 OR5T1Q8NG75 326 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 CHD8Q9HCK8 2581 aa16.48■□□□□ 0.23
CCDC47-202ENST00000403162 TRGV5A0A0B4J1U4 118 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.47■□□□□ 0.23
CCDC47-202ENST00000403162 MPDU1O75352 247 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 Q3ZCU0 254 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 Q6ZR03 302 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 MRPL41Q8IXM3 137 aaKnown RBP16.47■□□□□ 0.23
CCDC47-202ENST00000403162 DMRTC2Q8IXT2 367 aaPredicted RBP16.47■□□□□ 0.23
CCDC47-202ENST00000403162 TXNDC17Q9BRA2 123 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 QTRT1Q9BXR0 403 aaKnown RBP16.47■□□□□ 0.23
CCDC47-202ENST00000403162 OBP2BQ9NPH6 170 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 CRYAAP02489 173 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 MPV17P39210 176 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 PXMP4Q9Y6I8 212 aa16.47■□□□□ 0.23
CCDC47-202ENST00000403162 TRAV38-1A0A0B4J264 116 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 FAM90A9PA6NNJ1 464 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 ST8SIA5O15466 376 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 NDUFB4O95168 129 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 TGFBR3Q03167 851 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 GCSAMLQ5JQS6 135 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 CST9LP1Q5W188 147 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 ZNF826PQ6ZT77 177 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 KLF14Q8TD94 323 aaPredicted RBP16.46■□□□□ 0.23
CCDC47-202ENST00000403162 R3HDM4Q96D70 268 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 SPRR3Q9UBC9 169 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 TRAPPC1Q9Y5R8 145 aa16.46■□□□□ 0.23
CCDC47-202ENST00000403162 A0A1W2PPV4 95 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 IFNL4K9M1U5 179 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 IGHV1-2P23083 117 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 SSTR5P35346 364 aa16.45■□□□□ 0.22
CCDC47-202ENST00000403162 PAX5Q02548 391 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms