RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 SHISA2Q6UWI4 295 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 PPP1R27Q86WC6 154 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 ZFAND1Q8TCF1 268 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 WIPF2Q8TF74 440 aaPredicted RBP13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 ZNF486Q96H40 463 aaPredicted RBP13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 OR51J1Q9H342 316 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 SLC2A8Q9NY64 477 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 SCP2D1Q9UJQ7 156 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 TENM1Q9UKZ4 2725 aa13.55□□□□□ -0.24
PTCHD3P3-201ENST00000403073 AP4M1O00189 453 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 MPPED1O15442 326 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 HPRT1P00492 218 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 CTSDP07339 412 aaPredicted RBP13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 SAA1P0DJI8 122 aaPredicted RBP13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 CD28P10747 220 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 IL7P13232 177 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 F2RP25116 425 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 LPAR6P43657 344 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 PIGPP57054 158 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 MRGPRG-AS1Q2M3A8 158 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 ZNF585BQ52M93 769 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 STPG2Q8N412 459 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 TEX45Q8NA69 505 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 OR5AU1Q8NGC0 362 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 CD300LFQ8TDQ1 290 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 CITED1Q99966 193 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 RTBDNQ9BSG5 229 aaPredicted RBP13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 PARP11Q9NR21 331 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 GPR132Q9UNW8 380 aa13.54□□□□□ -0.24
PTCHD3P3-201ENST00000403073 ATP6V0E1O15342 81 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 S1PR2O95136 353 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 HRASP01112 189 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 ECI1P42126 302 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 RND3P61587 244 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 GNB1P62873 340 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 NDPQ00604 133 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 SURF2Q15527 256 aaPredicted RBP13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 SSX9Q7RTT3 188 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 CHPT1Q8WUD6 406 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 S100ZQ8WXG8 99 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 FBXO7Q9Y3I1 522 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 WSB1Q9Y6I7 421 aa13.53□□□□□ -0.24
PTCHD3P3-201ENST00000403073 PSMB11A5LHX3 300 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 G3V318 75 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ARPC1BO15143 372 aaKnown RBP13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 IGF1P05019 195 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 EGR2P11161 476 aaPredicted RBP13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 RPA2P15927 270 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SSBP2P81877 361 aaPredicted RBP13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 FXYD3Q14802 87 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 PRSS8Q16651 343 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ABHD5Q8WTS1 349 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 RHOVQ96L33 236 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 FAM103A1Q9BTL3 118 aaKnown RBP13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 C5orf66Q9H5L9 145 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 PLEKHA2Q9HB19 425 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 COPZ2Q9P299 210 aa13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 C14orf166Q9Y224 244 aaKnown RBP13.52□□□□□ -0.25
PTCHD3P3-201ENST00000403073 FBXO24O75426 580 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OR2A4O95047 310 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CNIH1O95406 144 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TAS2R31P59538 309 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TCTEX1D4Q5JR98 221 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 PUSL1Q8N0Z8 303 aaKnown RBP13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TCTEX1D1Q8N7M0 179 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CCDC71LQ8N9Z2 235 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 DEDD2Q8WXF8 326 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OR2A7Q96R45 310 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ZNF430Q9H8G1 570 aaPredicted RBP13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 VSIG4Q9Y279 399 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 DNHD1Q96M86 4753 aa13.51□□□□□ -0.25
PTCHD3P3-201ENST00000403073 C3orf85A0A1B0GTC6 90 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 NQO2P16083 231 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 VDAC1P21796 283 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SLC35B1P78383 322 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SP6Q3SY56 376 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 OR4A47Q6IF82 309 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ADAD2Q8NCV1 583 aaKnown RBP13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 DMBX1Q8NFW5 382 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 GRPEL2Q8TAA5 225 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ARPC1AQ92747 370 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 R3HDM4Q96D70 268 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 SCGB3A2Q96PL1 93 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TP53RKQ96S44 253 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CITED2Q99967 270 aaPredicted RBP13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 AIFM2Q9BRQ8 373 aa13.5□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TRAV41A0A0B4J266 112 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 KBTBD11O94819 623 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 KRASP01116 189 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 G6PCP35575 357 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CCR6P51684 374 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 CFHR3Q02985 330 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 ZNF846Q147U1 533 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 TNXAQ16473 311 aa13.49□□□□□ -0.25
PTCHD3P3-201ENST00000403073 POU2AF1Q16633 256 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 266.5 ms