RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 ID3Q02535 119 aa14.97□□□□□ -0.01
SNED1-204ENST00000401884 ARL16Q0P5N6 197 aa14.97□□□□□ -0.01
SNED1-204ENST00000401884 ZNF714Q96N38 554 aa14.97□□□□□ -0.01
SNED1-204ENST00000401884 AMMECR1Q9Y4X0 333 aaPredicted RBP14.97□□□□□ -0.01
SNED1-204ENST00000401884 PLPPR1Q8TBJ4 325 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 C17orf98A8MV24 154 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 TMEM250H0YL14 139 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 KBTBD11O94819 623 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 GAMTQ14353 236 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 ACP7Q6ZNF0 438 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 HNRNPA3P51991 378 aaKnown RBP14.96□□□□□ -0.01
SNED1-204ENST00000401884 LRTM2Q8N967 370 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 ZDHHC16Q969W1 377 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 RAB1BQ9H0U4 201 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 THYN1Q9P016 225 aa14.96□□□□□ -0.01
SNED1-204ENST00000401884 IFNL4K9M1U5 179 aa14.96□□□□□ -0.02
SNED1-204ENST00000401884 OTX1P32242 354 aaPredicted RBP14.96□□□□□ -0.02
SNED1-204ENST00000401884 CDX1P47902 265 aaPredicted RBP14.96□□□□□ -0.02
SNED1-204ENST00000401884 SLC35B1P78383 322 aa14.96□□□□□ -0.02
SNED1-204ENST00000401884 HIST3H3Q16695 136 aa14.96□□□□□ -0.02
SNED1-204ENST00000401884 FAM117AQ9C073 453 aa14.96□□□□□ -0.02
SNED1-204ENST00000401884 TRGC1P0CF51 173 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 USF1P22415 310 aaPredicted RBP14.95□□□□□ -0.02
SNED1-204ENST00000401884 IGHV1-2P23083 117 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 LRRC75BQ2VPJ9 315 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 KRTCAP3Q53RY4 240 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 STXBP6Q8NFX7 210 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 OR5AU1Q8NGC0 362 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 GTF3AQ92664 365 aaKnown RBP14.95□□□□□ -0.02
SNED1-204ENST00000401884 WDYHV1Q96HA8 205 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 DCTN5Q9BTE1 182 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 IGHV3-72A0A0B4J1Y9 119 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 TRAV24A0A0B4J272 114 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 ZNF785A8K8V0 405 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 FA2HQ7L5A8 372 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 IGHV3-21A0A0B4J1V1 117 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 RPL8P62917 257 aaKnown RBP14.95□□□□□ -0.02
SNED1-204ENST00000401884 ZNF385CQ66K41 422 aaPredicted RBP14.95□□□□□ -0.02
SNED1-204ENST00000401884 ASCL5Q7RTU5 278 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 TRAV34A0A0B4J273 112 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 CFPP27918 469 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 PQLC2Q6ZP29 291 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 OR13A1Q8NGR1 328 aa14.95□□□□□ -0.02
SNED1-204ENST00000401884 LINC00869P0C866 280 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 HTR1DP28221 377 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 METTL1Q9UBP6 276 aaKnown RBP14.94□□□□□ -0.02
SNED1-204ENST00000401884 PCNX2A6NKB5 2137 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 IGKV3D-15A0A087WSY6 115 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 CEACAM18A8MTB9 384 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 ARL14EPLP0DKL9 152 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 G0S2P27469 103 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 GLRXP35754 106 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 TMEM105Q8N8V8 129 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNED1-204ENST00000401884 AGAP20933 346 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 RPL39P5Q59GN2 51 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 SSX7Q7RTT5 188 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 PERPQ96FX8 193 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 QTRT1Q9BXR0 403 aaKnown RBP14.94□□□□□ -0.02
SNED1-204ENST00000401884 OR51M1Q9H341 326 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 ZDHHC8Q9ULC8 765 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 NOTCH3Q9UM47 2321 aa14.94□□□□□ -0.02
SNED1-204ENST00000401884 COL8A1P27658 744 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 CD81P60033 236 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 PKIAP61925 76 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 WFDC1Q9HC57 220 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 ASCL3Q9NQ33 180 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 ZNF525Q8N782 197 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 PAXXQ9BUH6 204 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 RNF24Q9Y225 148 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 SRP14P37108 136 aaKnown RBP14.93□□□□□ -0.02
SNED1-204ENST00000401884 IDI2-AS1Q9NZ38 188 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 SLC31A2O15432 143 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 GNG7O60262 68 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 OR4A8P0C604 315 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 MFAP2P55001 183 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 OR4D5Q8NGN0 318 aa14.93□□□□□ -0.02
SNED1-204ENST00000401884 RASL11BQ9BPW5 248 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 MMDQ15546 238 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 DIRC2Q96SL1 478 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 ZNF581Q9P0T4 197 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 USF3Q68DE3 2245 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 PLAUP00749 431 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 P01737 135 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 RPL27AP46776 148 aaKnown RBP14.92□□□□□ -0.02
SNED1-204ENST00000401884 CCL20P78556 96 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 SRSF4Q08170 494 aaKnown RBP14.92□□□□□ -0.02
SNED1-204ENST00000401884 FAM201AQ5SY85 155 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 LRP11Q86VZ4 500 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 OR8B3Q8NGG8 313 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 PRSS3P2Q8NHM4 247 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 OR8B2Q96RD0 313 aa14.92□□□□□ -0.02
SNED1-204ENST00000401884 HCP5Q6MZN7 132 aa14.91□□□□□ -0.02
SNED1-204ENST00000401884 OR1P1Q8NH06 330 aa14.91□□□□□ -0.02
SNED1-204ENST00000401884 MEGF10Q96KG7 1140 aa14.91□□□□□ -0.02
SNED1-204ENST00000401884 NPCDR1Q9BY65 106 aa14.91□□□□□ -0.02
SNED1-204ENST00000401884 IQCF6A8MYZ5 107 aa14.91□□□□□ -0.02
SNED1-204ENST00000401884 BMPERQ8N8U9 685 aa14.91□□□□□ -0.02
SNED1-204ENST00000401884 CLDND2Q8NHS1 167 aa14.91□□□□□ -0.02
SNED1-204ENST00000401884 DOCK11Q5JSL3 2073 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms