RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 UNQ9370/PRO34162Q6UXP9 181 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 LINC00305Q7Z4B0 112 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 CLEC7AQ9BXN2 247 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 ZNF430Q9H8G1 570 aaPredicted RBP11.75□□□□□ -0.53
VAPA-202ENST00000400000 PTP4A3O75365 173 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
VAPA-202ENST00000400000 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 MRPL18Q9H0U6 180 aaKnown RBP11.75□□□□□ -0.53
VAPA-202ENST00000400000 C7orf69Q9H7B7 122 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 LINC00527Q9UJ94 153 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 CELA3BP08861 270 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 GPR183P32249 361 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 GFI1BQ5VTD9 330 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 LINC01587Q99440 93 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 OR51M1Q9H341 326 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 MC5RP33032 325 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 P2RY6Q15077 328 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 GCSAMQ8N6F7 178 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 MAP1LC3AQ9H492 121 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 CEACAM4O75871 244 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 ZNF79Q15937 498 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 LIPFP07098 398 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 TMEM170BQ5T4T1 132 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 ZNF418Q8TF45 676 aaPredicted RBP11.74□□□□□ -0.53
VAPA-202ENST00000400000 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 TMEM127O75204 238 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 SOD3P08294 240 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 HOXA6P31267 233 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 PGPEP1Q9NXJ5 209 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 RIPPLY3P57055 190 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 FUT5Q11128 374 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 PPP1R32Q7Z5V6 425 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 MARCH11A6NNE9 402 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 FHITP49789 147 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 SCAND1P57086 179 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 ICAM4Q14773 271 aa11.74□□□□□ -0.53
VAPA-202ENST00000400000 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 A8MWL6 223 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 RBFOX2O43251 390 aaKnown RBP eCLIP11.73□□□□□ -0.53
VAPA-202ENST00000400000 SURF2Q15527 256 aaPredicted RBP11.73□□□□□ -0.53
VAPA-202ENST00000400000 ERASQ7Z444 233 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
VAPA-202ENST00000400000 FAM131CQ96AQ9 280 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 KLF4O43474 513 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 FGF5P12034 268 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 UBE2V2Q15819 145 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 H0Y980 276 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 BCL2P10415 239 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 PRR31Q5SQ13 230 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 SLC25A47Q6Q0C1 308 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 CHAC2Q8WUX2 184 aa11.73□□□□□ -0.53
VAPA-202ENST00000400000 SCARF2Q96GP6 870 aaPredicted RBP11.73□□□□□ -0.53
VAPA-202ENST00000400000 NPIPB11E5RHQ5 1161 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
VAPA-202ENST00000400000 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 ST6GALNAC6Q969X2 333 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 MARS2Q96GW9 593 aaKnown RBP11.72□□□□□ -0.53
VAPA-202ENST00000400000 SYNGR3O43761 229 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 OR51G1Q8NGK1 321 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 LOXL4Q96JB6 756 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 SRIP30626 198 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 TMEM105Q8N8V8 129 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 LRP5O75197 1615 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
VAPA-202ENST00000400000 PILRAQ9UKJ1 303 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 STPG3Q8N7X2 389 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 CD1AP06126 327 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 HKR1P10072 659 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 FAM71F2Q6NXP2 309 aa11.72□□□□□ -0.53
VAPA-202ENST00000400000 CDS2O95674 445 aa11.71□□□□□ -0.53
VAPA-202ENST00000400000 FOXA3P55318 350 aaPredicted RBP11.71□□□□□ -0.53
VAPA-202ENST00000400000 TRGV2A0A075B6R0 118 aa11.71□□□□□ -0.53
VAPA-202ENST00000400000 SFTA2Q6UW10 78 aa11.71□□□□□ -0.53
VAPA-202ENST00000400000 TDGF1P13385 188 aa11.71□□□□□ -0.53
VAPA-202ENST00000400000 TAF15Q92804 592 aaKnown RBP eCLIP11.71□□□□□ -0.53
VAPA-202ENST00000400000 GP6Q9HCN6 339 aa11.71□□□□□ -0.53
VAPA-202ENST00000400000 ELOA3CA0A087WX78 387 aaPredicted RBP11.71□□□□□ -0.54
VAPA-202ENST00000400000 PSG9Q00887 426 aa11.71□□□□□ -0.54
VAPA-202ENST00000400000 SIGIRRQ6IA17 410 aa11.71□□□□□ -0.54
VAPA-202ENST00000400000 WDR82Q6UXN9 313 aa11.71□□□□□ -0.54
VAPA-202ENST00000400000 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 NDUFA3O95167 84 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 P2RY4P51582 365 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 ARAP2Q8WZ64 1704 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 APOBEC3AP31941 199 aaPredicted RBP11.7□□□□□ -0.54
VAPA-202ENST00000400000 TNFRSF9Q07011 255 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 FAM74A3Q4VXF1 159 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 PRR32B1ATL7 298 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 COLCA1Q6ZS62 124 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
VAPA-202ENST00000400000 AQP10Q96PS8 301 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms