RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 C1QTNF9P0C862 333 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 ADMP35318 185 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 TMEM50BP56557 158 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 ABHD14BQ96IU4 210 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 EGLN1Q9GZT9 426 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 CEACAM3P40198 252 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 ZADH2Q8N4Q0 377 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 PLPPR1Q8TBJ4 325 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 BADQ92934 168 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 TRAV14DV4A0A0A6YYC5 116 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1W2PPE3 182 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 PRKNO60260 465 aaPredicted RBP8.28□□□□□ -1.08
SMAD9-203ENST00000399275 C19orf54Q5BKX5 351 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 RTN4RQ9BZR6 473 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 KLK15Q9H2R5 256 aa8.28□□□□□ -1.08
SMAD9-203ENST00000399275 UBE2ZQ9H832 354 aaPredicted RBP8.28□□□□□ -1.08
SMAD9-203ENST00000399275 CENPVL1A0A0U1RR11 272 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 H0Y8X5 98 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 MS4A18H0YCH9 400 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 H3BTX0 84 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 TNFSF14O43557 240 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 TBC1D28Q2M2D7 210 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 MS4A18Q3C1V0 323 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 TMEM170BQ5T4T1 132 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 SLC23A3Q6PIS1 610 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 SYT8Q8NBV8 401 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 SLC25A40Q8TBP6 338 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 PATE1Q8WXA2 126 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.08
SMAD9-203ENST00000399275 TTC3P53804 2025 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 TRGV10A0A0A0MS01 117 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 ACP1P24666 158 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 LGALS4P56470 323 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 GNG5P63218 68 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 C3AR1Q16581 482 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 C2orf68Q2NKX9 166 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 FBXW9Q5XUX1 488 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 CBLN3Q6UW01 205 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 NUP214P35658 2090 aaPredicted RBP8.27□□□□□ -1.09
SMAD9-203ENST00000399275 RNF222A6NCQ9 220 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 FGF16O43320 207 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 SSTR5P35346 364 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 VMA21Q3ZAQ7 101 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 PRSS41Q7RTY9 318 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 ZAR1Q86SH2 424 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 SFTPA2Q8IWL1 248 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 SFTPA1Q8IWL2 248 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 BCL6BQ8N143 479 aaPredicted RBP8.27□□□□□ -1.09
SMAD9-203ENST00000399275 A0A1B0GTI1 187 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 PRDX2P32119 198 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 CA7P43166 264 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 ERVK11-1P61568 191 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.27□□□□□ -1.09
SMAD9-203ENST00000399275 ANKRD29Q8N6D5 301 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 PAXXQ9BUH6 204 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 SLC25A2Q9BXI2 301 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 TMEM126AQ9H061 195 aa8.27□□□□□ -1.09
SMAD9-203ENST00000399275 COL11A1P12107 1806 aaPredicted RBP8.26□□□□□ -1.09
SMAD9-203ENST00000399275 A0A087X0K7 114 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 SRFP11831 508 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 SARGQ9BW04 601 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 CLEC1BQ9P126 229 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 PSMB11A5LHX3 300 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 FAM231BA6NCW3 169 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 FAM157AC9JC47 383 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 PPP1R17O96001 155 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
SMAD9-203ENST00000399275 GAPTQ8N292 157 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 TAF15Q92804 592 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMAD9-203ENST00000399275 C20orf144Q9BQM9 153 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 LRRC10Q5BKY1 277 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 TMEM211Q6ICI0 200 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 VKORC1L1Q8N0U8 176 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 IGHV3-20A0A0C4DH32 117 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 TMEM30CPA0ZSE6 113 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 OR2H2O95918 312 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 PPYP01298 95 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 PSG9Q00887 426 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 PDCD1Q15116 288 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 ETDBQ3ZM63 59 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 PPP1R27Q86WC6 154 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 KIR3DL3Q8N743 410 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 SVIPQ8NHG7 77 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 DYNLRB1Q9NP97 96 aa8.26□□□□□ -1.09
SMAD9-203ENST00000399275 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
SMAD9-203ENST00000399275 GPR6P46095 362 aaPredicted RBP8.25□□□□□ -1.09
SMAD9-203ENST00000399275 TEX38Q6PEX7 206 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 C2orf82Q6UX34 121 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 ELSPBP1Q96BH3 223 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 SSBP3Q9BWW4 388 aaPredicted RBP8.25□□□□□ -1.09
SMAD9-203ENST00000399275 GPR27Q9NS67 375 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 PXMP4Q9Y6I8 212 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 F8VVB4 439 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 F8VWA3 439 aa8.25□□□□□ -1.09
SMAD9-203ENST00000399275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.25□□□□□ -1.09
SMAD9-203ENST00000399275 LGALS1P09382 135 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms