RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TTC28Q96AY4 2481 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 IGKV3D-15A0A087WSY6 115 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 ARR3P36575 388 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 CATR1Q13166 79 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 SPINK14Q6IE38 97 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 OR1L6Q8NGR2 347 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 SAP25Q8TEE9 199 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 WDR83OSQ9Y284 106 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 RNF114Q9Y508 228 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 FRYQ5TBA9 3013 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 WDFY4Q6ZS81 3184 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 C12orf77C9JDV5 145 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 NEURL1O76050 574 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 CLDN14O95500 239 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 TFF1P04155 84 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 GALMQ96C23 342 aa11.68□□□□□ -0.54
APOB-202ENST00000399256 RRHO14718 337 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 RAB29O14966 203 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 PSPNO60542 156 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 IER3P46695 156 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 APH1AQ96BI3 265 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 RTL8AQ9BWD3 113 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 CELSR3Q9NYQ7 3312 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 IGHV3-43A0A0B4J1X8 118 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 FCN1O00602 326 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 SH2D1BO14796 132 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 IGHV3-43DP0DP04 118 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 TGFBR3Q03167 851 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 PSG7Q13046 419 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
APOB-202ENST00000399256 KRTCAP3Q53RY4 240 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 CBY1Q9Y3M2 126 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 PPIAL4AQ9Y536 164 aa11.67□□□□□ -0.54
APOB-202ENST00000399256 LINC00473A8K010 186 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 K7EN84 100 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 GRPP07492 148 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 IL6RP08887 468 aaPredicted RBP11.66□□□□□ -0.54
APOB-202ENST00000399256 SP9P0CG40 484 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 COMPP49747 757 aaPredicted RBP11.66□□□□□ -0.54
APOB-202ENST00000399256 KRTDAPP60985 99 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
APOB-202ENST00000399256 TRIP6Q15654 476 aaKnown RBP11.66□□□□□ -0.54
APOB-202ENST00000399256 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 MRPL52Q86TS9 123 aaKnown RBP11.66□□□□□ -0.54
APOB-202ENST00000399256 YTHDF2Q9Y5A9 579 aaKnown RBP11.66□□□□□ -0.54
APOB-202ENST00000399256 HBZP02008 142 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 CYB561P49447 251 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 RANP62826 216 aaKnown RBP11.66□□□□□ -0.54
APOB-202ENST00000399256 AESQ08117 197 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 C3AR1Q16581 482 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 IL36BQ9NZH7 164 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 FBXL7Q9UJT9 491 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 DEFB108AA8MXU0 73 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 SNURFLB1AK76 121 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 AQP7O14520 342 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 IGHEP01854 428 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 CFIP05156 583 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 LINC00614P0C842 121 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 PPP1R32Q7Z5V6 425 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 MRGPRDQ8TDS7 321 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 RAB1CQ92928 201 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 NINJ1Q92982 152 aa11.66□□□□□ -0.54
APOB-202ENST00000399256 GTF3C1Q12789 2109 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 FAM166BA8MTA8 275 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 PATE3B3GLJ2 98 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 SPINK4O60575 86 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 HAND1O96004 215 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 OR9G9P0C7N8 305 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 LRFN3Q9BTN0 628 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 C12orf49Q9H741 205 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 TMEM30CPA0ZSE6 113 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 ALKBH6Q3KRA9 238 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 PDLIM3Q53GG5 364 aaPredicted RBP11.65□□□□□ -0.54
APOB-202ENST00000399256 CXorf67Q86X51 503 aaPredicted RBP11.65□□□□□ -0.54
APOB-202ENST00000399256 TPRX1Q8N7U7 411 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 SSMEM1Q8WWF3 244 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 HES7Q9BYE0 225 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 OPN3Q9H1Y3 402 aaPredicted RBP11.65□□□□□ -0.54
APOB-202ENST00000399256 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
APOB-202ENST00000399256 ESDP10768 282 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 CLDN18P56856 261 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 RPL31P62899 125 aaKnown RBP11.64□□□□□ -0.55
APOB-202ENST00000399256 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 MGST2Q99735 147 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 CACNA1DQ01668 2161 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 WNT9BO14905 357 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 TCF21O43680 179 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 STAG3L3P0CL85 134 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 RAB7AP51149 207 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 ZNF146Q15072 292 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 MDP1Q86V88 176 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 Q8IYB0 196 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 C11orf42Q8N5U0 333 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 SIGLECL1Q8N7X8 197 aa11.64□□□□□ -0.55
APOB-202ENST00000399256 OR2M7Q8NG81 312 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms