RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SMIM17P0DL12 118 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 EGR1P18146 543 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 GLIPR1P48060 266 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 PSMB3P49720 205 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 GNG10P50151 68 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 FOXO1Q12778 655 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 OR4C12Q96R67 309 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 NIPSNAP3BQ9BS92 247 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 AP4M1O00189 453 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 IGLV3-1P01715 115 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 PGA5P0DJD9 388 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 WNT5AP41221 380 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 DRAM1Q8N682 238 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 GPR61Q9BZJ8 451 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 CTDSP1Q9GZU7 261 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 CXXC4Q9H2H0 198 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 IGKV1-6A0A0C4DH72 117 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 CXorf65A6NEN9 183 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 NEURL1O76050 574 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM42Q69YG0 159 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 SPSB3Q6PJ21 355 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 NPFFR1Q9GZQ6 430 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 TOLLIPQ9H0E2 274 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM9BQ9NQ34 198 aa4.19□□□□□ -1.74
SMAD4-202ENST00000398417 SPINT2O43291 252 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 CELA3BP08861 270 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TGFBR3Q03167 851 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 NDFIP1Q9BT67 221 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 PHOX2AO14813 284 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 BUB3O43684 328 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 DKK1O94907 266 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 CRYAAP02489 173 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TRGC2P03986 189 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 COX5BP10606 129 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 ID3Q02535 119 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 FBXW9Q5XUX1 488 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF525Q8N782 197 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 GTF3AQ92664 365 aaKnown RBP4.18□□□□□ -1.74
SMAD4-202ENST00000398417 R3HDM4Q96D70 268 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 FAM210BQ96KR6 192 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 POM121L2Q96KW2 1035 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 PTPRQQ9UMZ3 2332 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 H0Y980 276 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 OR8U8P0C7N1 319 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 HBG1P69891 147 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 HBG2P69892 147 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 PRR27Q6MZM9 219 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 OR13A1Q8NGR1 328 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 OR10AG1Q8NH19 301 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 WDYHV1Q96HA8 205 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 ABHD14BQ96IU4 210 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM56Q96MV1 263 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM204Q9BSN7 226 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 MSL2Q9HCI7 577 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 KIAA1456Q9P272 454 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM56-RWDD3S4R434 201 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 SPTAN1Q13813 2472 aaKnown RBP4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TRAV24A0A0B4J272 114 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 OR5B21A6NL26 309 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 RPS23P62266 143 aaKnown RBP4.18□□□□□ -1.74
SMAD4-202ENST00000398417 ICAM4Q14773 271 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 GATAD1Q8WUU5 269 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 DIRC2Q96SL1 478 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 METRNQ9UJH8 293 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 COL12A1Q99715 3063 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 EXPH5Q8NEV8 1989 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 ALPK3Q96L96 1907 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 FCER1GP30273 86 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 LHX2P50458 406 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 FAM201AQ5SY85 155 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 VWA1Q6PCB0 445 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 H1FOOQ8IZA3 346 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-202ENST00000398417 REPIN1Q9BWE0 567 aaKnown RBP4.18□□□□□ -1.74
SMAD4-202ENST00000398417 CLCF1Q9UBD9 225 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 DSCAML1Q8TD84 2053 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 SMPD2O60906 423 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 S1PR2O95136 353 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM50AO95807 157 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 SRSF6Q13247 344 aaKnown RBP4.18□□□□□ -1.74
SMAD4-202ENST00000398417 GAMTQ14353 236 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 FFAR4Q5NUL3 377 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 FAM78BQ5VT40 261 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 FGFRL1Q8N441 504 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 WDR31Q8NA23 367 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM37Q8WXS4 190 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 TMEM101Q96IK0 257 aa4.18□□□□□ -1.74
SMAD4-202ENST00000398417 DUXBA0A1W2PPF3 345 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 A0A1W2PPQ1 181 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 C17orf98A8MV24 154 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 OTX1P32242 354 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 CHRNA7P36544 502 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF83P51522 516 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 UCP2P55851 309 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 WDR25Q64LD2 544 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF324BQ6AW86 544 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-202ENST00000398417 WDR73Q6P4I2 378 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 ARV1Q9H2C2 271 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 EML5Q05BV3 1969 aa4.17□□□□□ -1.74
SMAD4-202ENST00000398417 A0A1B0GU03 582 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms