RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 LPCAT3Q6P1A2 487 aa16.64■□□□□ 0.25
TSPAN4-206ENST00000397408 ZNF562Q6V9R5 426 aa16.64■□□□□ 0.25
TSPAN4-206ENST00000397408 LHFPL1Q86WI0 220 aa16.64■□□□□ 0.25
TSPAN4-206ENST00000397408 SLC38A6Q8IZM9 456 aa16.64■□□□□ 0.25
TSPAN4-206ENST00000397408 TEX45Q8NA69 505 aa16.64■□□□□ 0.25
TSPAN4-206ENST00000397408 OR6Q1Q8NGQ2 317 aa16.64■□□□□ 0.25
TSPAN4-206ENST00000397408 RSRP1Q9BUV0 290 aa16.64■□□□□ 0.25
TSPAN4-206ENST00000397408 VWFP04275 2813 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 AKAIN1P0CW23 69 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 PGAM2P15259 253 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 PPP5CP53041 499 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 UCP3P55916 312 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 CFHR3Q02985 330 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 ZNF79Q15937 498 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 ECSCRQ19T08 205 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 SCGB2B2Q4G0G5 96 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 TEX38Q6PEX7 206 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 VKORC1L1Q8N0U8 176 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 COMMD1Q8N668 190 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 OR4C16Q8NGL9 310 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 ARPC1AQ92747 370 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 FAM103A1Q9BTL3 118 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 MGAM2Q2M2H8 2515 aa16.63■□□□□ 0.25
TSPAN4-206ENST00000397408 TRAV41A0A0B4J266 112 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 ANKRD20A5PA0PJZ0 165 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 ADARB2-AS1A8MUL3 147 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 RBFOX2O43251 390 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■□ 21.7
TSPAN4-206ENST00000397408 S100GP29377 79 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 FXYD3Q14802 87 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 POC5Q8NA72 575 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 GRPEL2Q8TAA5 225 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 THAP7Q9BT49 309 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 TSSC4Q9Y5U2 329 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 TNCP24821 2201 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 ARPC1BO15143 372 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 CNIH1O95406 144 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 ZNF735P0CB33 412 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 PTBP1P26599 531 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 ETV6P41212 452 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 CRIP2P52943 208 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 SSBP2P81877 361 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 Q8N402 240 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 TRIM63Q969Q1 353 aa16.62■□□□□ 0.25
TSPAN4-206ENST00000397408 PKD1L1Q8TDX9 2849 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 DISC1C4P0D8 188 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 HRASP01112 189 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 IGHG4P01861 327 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 EGR2P11161 476 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 FOXE3Q13461 319 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 PRSS8Q16651 343 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 MRGPRG-AS1Q2M3A8 158 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 SSX9Q7RTT3 188 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 TERB2Q8NHR7 220 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 CD300LFQ8TDQ1 290 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 RHOVQ96L33 236 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 SLC2A9Q9NRM0 540 aa16.61■□□□□ 0.25
TSPAN4-206ENST00000397408 S1PR2O95136 353 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 HPRT1P00492 218 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 PI3P19957 117 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 PPIFP30405 207 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 TNXAQ16473 311 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 C19orf54Q5BKX5 351 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 CXorf66Q5JRM2 361 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 TREML4Q6UXN2 200 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 LCNL1Q6ZST4 164 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 TBC1D26Q86UD7 250 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 VSTM2AQ8TAG5 236 aa16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 FAM110DQ8TAY7 271 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 ZNF430Q9H8G1 570 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-206ENST00000397408 A6NHS1 94 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 CREBL2O60519 120 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 OR2A4O95047 310 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 ELANEP08246 267 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 F2RP25116 425 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 RPL23AP62750 156 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 TMEM267Q0VDI3 215 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 UNQ5815/PRO19632Q6UWF5 114 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 PUSL1Q8N0Z8 303 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 LFNGQ8NES3 379 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 R3HDM4Q96D70 268 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 OR2A7Q96R45 310 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 SRRQ9GZT4 340 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 NUBP2Q9Y5Y2 271 aa16.59■□□□□ 0.25
TSPAN4-206ENST00000397408 A0A1W2PN81 502 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 KBTBD11O94819 623 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 RPLP1P05386 114 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 NQO2P16083 231 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 CHRNA7P36544 502 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 TAS2R31P59538 309 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 MMD2Q8IY49 270 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 TCTEX1D1Q8N7M0 179 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 MINDY2Q8NBR6 621 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 OR4F17Q8NGA8 305 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 OR13C8Q8NGS7 320 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 MARCH1Q8TCQ1 289 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 MRGPRFQ96AM1 343 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 ZNF486Q96H40 463 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 OR4F4Q96R69 305 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 PRRT1Q99946 306 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 PLEKHA2Q9HB19 425 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms