RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NMSQ5H8A3 153 aa13.62□□□□□ -0.23
TSPAN4-205ENST00000397406 CCDC144NLQ6NUI1 221 aa13.62□□□□□ -0.23
TSPAN4-205ENST00000397406 ST6GAL2Q96JF0 529 aa13.62□□□□□ -0.23
TSPAN4-205ENST00000397406 ZNF436Q9C0F3 470 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-205ENST00000397406 COMMD9Q9P000 198 aa13.62□□□□□ -0.23
TSPAN4-205ENST00000397406 A0A0G2JRQ6 117 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 H7C2Y5 167 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 OR2A4O95047 310 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 IFNA21P01568 189 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 P0C879 139 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 SRD5A1P18405 259 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 VDAC1P21796 283 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 G6PCP35575 357 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 RAB13P51153 203 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 CD83Q01151 205 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 TMEM177Q53S58 311 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 AKAP14Q86UN6 197 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 LSM10Q969L4 123 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 R3HDM4Q96D70 268 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 WDR89Q96FK6 387 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 OR10C1Q96KK4 312 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 OR2A7Q96R45 310 aa13.61□□□□□ -0.23
TSPAN4-205ENST00000397406 CCNKO75909 580 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 KRASP01116 189 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 CD1BP29016 333 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 SRSF4Q08170 494 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 POU2AF1Q16633 256 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 GSG1LQ6UXU4 331 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 OR4C13Q8NGP0 309 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 OSR1Q8TAX0 266 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 GPR146Q96CH1 333 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 MMP24Q9Y5R2 645 aa13.6□□□□□ -0.23
TSPAN4-205ENST00000397406 FBN3Q75N90 2809 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 A0A0U1RQK1 487 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 C13orf42A0A1B0GVH6 325 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 C5orf51A6NDU8 294 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 MARCH11A6NNE9 402 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 FAM25EA8MYX2 175 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 ATG12O94817 140 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 VENTXO95231 258 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 NQO2P16083 231 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 AKR1C2P52895 323 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 BPIFB3P59826 476 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 CD300CQ08708 224 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 NANPQ8TBE9 248 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 FLYWCH2Q96CP2 140 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 CHIAQ9BZP6 476 aa13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 RANGRFQ9HD47 186 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 SOX21Q9Y651 276 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-205ENST00000397406 FAM90A9PA6NNJ1 464 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 SRRM4A7MD48 611 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 PFDN1O60925 122 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 HRASP01112 189 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 GIPP09681 153 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 IZUMO4Q1ZYL8 232 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 FAM219AQ8IW50 185 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 VKORC1L1Q8N0U8 176 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 RRNAD1Q96FB5 475 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 RITA1Q96K30 269 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 C2orf50Q96LR7 162 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 MS4A7Q9GZW8 240 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 MEGF9Q9H1U4 602 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 NUP50Q9UKX7 468 aa13.58□□□□□ -0.24
TSPAN4-205ENST00000397406 SHOXO15266 292 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 IGLV2-23P01705 113 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 SLC25A6P12236 298 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 IL15RAQ13261 267 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 IAH1Q2TAA2 248 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 Q6ZRM9 215 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 ZBTB8BQ8NAP8 495 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 RNASE11Q8TAA1 199 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 ASB13Q8WXK3 278 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 RHOVQ96L33 236 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 FYTTD1Q96QD9 318 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 PDCD10Q9BUL8 212 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 NMES1Q9C002 83 aa13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-205ENST00000397406 SNRNP70P08621 437 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 ARHGDIBP52566 201 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 RAP2BP61225 183 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 ERVK-16P61578 105 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 RPS16P62249 146 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 EBI3Q14213 229 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 FBLN7Q53RD9 439 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 C9orf139Q6ZV77 190 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 SSX9Q7RTT3 188 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 H2BFWTQ7Z2G1 175 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 DMBX1Q8NFW5 382 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 SPIN2AQ99865 258 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 SPIN2BQ9BPZ2 258 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 RANBP3Q9H6Z4 567 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 TMEM140Q9NV12 185 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 A0A1B0GU03 582 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 PITX3O75364 302 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 IGKV1D-33P01593 117 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 IGKV1-33P01594 117 aa13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 IL6RP08887 468 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-205ENST00000397406 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms