RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 RAMP3O60896 148 aa13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 PGLYRP1O75594 196 aaPredicted RBP13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 IGHG4P01861 327 aa13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 IFNA6P05013 189 aa13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 PTBP1P26599 531 aaKnown RBP eCLIP13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 PJVKQ0ZLH3 352 aa13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 VMA21Q3ZAQ7 101 aa13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 TEX38Q6PEX7 206 aa13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 SPAG16Q8N0X2 631 aa13.94□□□□□ -0.18
TNFSF13-204ENST00000396542 TRAV41A0A0B4J266 112 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 G3V318 75 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 ARPC1BO15143 372 aaKnown RBP13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 RAB3DO95716 219 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 ZNF735P0CB33 412 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 SAA1P0DJI8 122 aaPredicted RBP13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 ETV6P41212 452 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 FOXE3Q13461 319 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 ZNF79Q15937 498 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 NSUN5P1Q3KNT7 163 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 TREML4Q6UXN2 200 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 CMTM1Q8IZ96 169 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 SLC38A6Q8IZM9 456 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 MINDY2Q8NBR6 621 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 OR6Q1Q8NGQ2 317 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 NUBP2Q9Y5Y2 271 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 WSB1Q9Y6I7 421 aa13.93□□□□□ -0.18
TNFSF13-204ENST00000396542 ANKRD20A5PA0PJZ0 165 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 IGLV1-40P01703 118 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 RLN1P04808 185 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 ELANEP08246 267 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 PSMB8P28062 276 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 MEF2DQ14814 521 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 PRSS8Q16651 343 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 IDO2Q6ZQW0 420 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 OR51H1Q8NH63 302 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 CD300LFQ8TDQ1 290 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 ARPC1AQ92747 370 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 ZFP57Q9NU63 452 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 CMYA5Q8N3K9 4069 aa13.92□□□□□ -0.18
TNFSF13-204ENST00000396542 A6NHS1 94 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 HPRT1P00492 218 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 HRASP01112 189 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 AKAIN1P0CW23 69 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 FXYD3Q14802 87 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 VKORC1L1Q8N0U8 176 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 PUSL1Q8N0Z8 303 aaKnown RBP13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 TCTEX1D1Q8N7M0 179 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 TERB2Q8NHR7 220 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 TRIM63Q969Q1 353 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 MRGPRFQ96AM1 343 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 ZNF486Q96H40 463 aaPredicted RBP13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 RHOVQ96L33 236 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 THAP7Q9BT49 309 aaPredicted RBP13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 FAM103A1Q9BTL3 118 aaKnown RBP13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 TNCP24821 2201 aa13.91□□□□□ -0.18
TNFSF13-204ENST00000396542 F2RP25116 425 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 TAS2R31P59538 309 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 RPL23AP62750 156 aaKnown RBP13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 TMEM267Q0VDI3 215 aaPredicted RBP13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 POU2AF1Q16633 256 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 ECSCRQ19T08 205 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 PHLDA2Q53GA4 152 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 FAAP20Q6NZ36 180 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 POC5Q8NA72 575 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 OR4F17Q8NGA8 305 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 OR4C16Q8NGL9 310 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 VSTM2AQ8TAG5 236 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 TMEM167AQ8TBQ9 72 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 OR4F4Q96R69 305 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 ZNF430Q9H8G1 570 aaPredicted RBP13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 PLEKHA2Q9HB19 425 aa13.9□□□□□ -0.18
TNFSF13-204ENST00000396542 A0A1W2PRX2 142 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 SOX15O60248 233 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 CREBL2O60519 120 aaPredicted RBP13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 KBTBD11O94819 623 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 OR2A4O95047 310 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 CNIH1O95406 144 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 RPLP1P05386 114 aaKnown RBP13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 RND3P61587 244 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 GNB1P62873 340 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 PYDC2Q56P42 97 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 CXorf66Q5JRM2 361 aaPredicted RBP13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 MMD2Q8IY49 270 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 Q8N402 240 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 LFNGQ8NES3 379 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 GRPEL2Q8TAA5 225 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 ABHD5Q8WTS1 349 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 OR2A7Q96R45 310 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 AIFM2Q9BRQ8 373 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 SLC2A9Q9NRM0 540 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 FAM212BQ9NTI7 297 aaPredicted RBP13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 COMMD9Q9P000 198 aa13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 FOXA2Q9Y261 457 aaPredicted RBP13.89□□□□□ -0.19
TNFSF13-204ENST00000396542 DISC1C4P0D8 188 aa13.88□□□□□ -0.19
TNFSF13-204ENST00000396542 S1PR2O95136 353 aa13.88□□□□□ -0.19
TNFSF13-204ENST00000396542 IL6RP08887 468 aaPredicted RBP13.88□□□□□ -0.19
TNFSF13-204ENST00000396542 NQO2P16083 231 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms