RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 RAP1AP62834 184 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
GABPB1-204ENST00000396464 RHEBQ15382 184 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 LTC4SQ16873 150 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 CGB2Q6NT52 195 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 EBLN2Q6P2I7 272 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 AGTRAPQ6RW13 159 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 UNQ9165/PRO28630Q6UXU0 137 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 FA2HQ7L5A8 372 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF329Q86UD4 541 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 LRRC28Q86X40 367 aaPredicted RBP3.58□□□□□ -1.84
GABPB1-204ENST00000396464 SGPP2Q8IWX5 399 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF555Q8NEP9 628 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 OR1L1Q8NH94 360 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 THEM6Q8WUY1 208 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 OR5P3Q8WZ94 311 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 GPR146Q96CH1 333 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 PLEKHB2Q96CS7 222 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 STARD4Q96DR4 205 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 TMEM101Q96IK0 257 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 TMEM70Q9BUB7 260 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 TBL1XR1Q9BZK7 514 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 CHST6Q9GZX3 395 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 TMEM126AQ9H061 195 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 CXorf21Q9HAI6 301 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 SPANXCQ9NY87 97 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 DEC1Q9P2X7 70 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 DHCR7Q9UBM7 475 aaKnown RBP3.58□□□□□ -1.84
GABPB1-204ENST00000396464 RPS6KB2Q9UBS0 482 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 TBX21Q9UL17 535 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 COQ4Q9Y3A0 265 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 ADGRB1O14514 1584 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 FMN2Q9NZ56 1722 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 KMT2EQ8IZD2 1858 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 NAV1Q8NEY1 1877 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 DLC1Q96QB1 1528 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 KIF1AQ12756 1690 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 MIA3Q5JRA6 1907 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 RGPD8O14715 1765 aaPredicted RBP3.57□□□□□ -1.84
GABPB1-204ENST00000396464 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.57□□□□□ -1.84
GABPB1-204ENST00000396464 ADGRB2O60241 1585 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 ADAMTS13Q76LX8 1427 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 TMEM72A0PK05 275 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 B4DEV8 164 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 H3BSA7 217 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 M0R381 172 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 AIPO00170 330 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 DEDDO75618 318 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 APOMO95445 188 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 FSTL3O95633 263 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 RPL7P18124 248 aaKnown RBP3.57□□□□□ -1.84
GABPB1-204ENST00000396464 BLVRBP30043 206 aaPredicted RBP3.57□□□□□ -1.84
GABPB1-204ENST00000396464 GABRA3P34903 492 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 INPP1P49441 399 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 LINC00313P59037 77 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 ELOCQ15369 112 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 OR8B8Q15620 311 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 MRPL2Q5T653 305 aaKnown RBP3.57□□□□□ -1.84
GABPB1-204ENST00000396464 C4orf22Q6V702 233 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 Q8N377 158 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 LINC01555Q8NAE3 123 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 GGTLC1Q9BX51 225 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 MED28Q9H204 178 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF556Q9HAH1 456 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 HSPB8Q9UJY1 196 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 TCF20Q9UGU0 1960 aaKnown RBP3.57□□□□□ -1.84
GABPB1-204ENST00000396464 MYOM1P52179 1685 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 RTL1A6NKG5 1358 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 STRCP1A6NGW2 1772 aa3.57□□□□□ -1.84
GABPB1-204ENST00000396464 PPIP5K1Q6PFW1 1433 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 TMEM189A5PLL7 270 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 AMBPP02760 352 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 HLA-DQB2P05538 268 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 MPC1LP0DKB6 136 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 TNFAIP6P98066 277 aaPredicted RBP3.56□□□□□ -1.84
GABPB1-204ENST00000396464 TIMM50Q3ZCQ8 353 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 KLHDC8BQ8IXV7 354 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 TMEM86AQ8N2M4 240 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 C12orf45Q8N5I9 185 aaPredicted RBP3.56□□□□□ -1.84
GABPB1-204ENST00000396464 KRTCAP2Q8N6L1 136 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 FAM57AQ8TBR7 257 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 MALSU1Q96EH3 234 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 ABHD14BQ96IU4 210 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 NMNAT3Q96T66 252 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 CHAC1Q9BUX1 264 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 PBOV1Q9GZY1 135 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF581Q9P0T4 197 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 TULP4Q9NRJ4 1543 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 TOPAZ1Q8N9V7 1692 aa3.56□□□□□ -1.84
GABPB1-204ENST00000396464 FAM135BQ49AJ0 1406 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 BORCS7-ASMTA0A0B4J1R7 106 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 CLDN25C9JDP6 229 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 PIRO00625 290 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 SUPT7LO94864 414 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 RPS3P23396 243 aaKnown RBP eCLIP3.55□□□□□ -1.84
GABPB1-204ENST00000396464 CD200P41217 278 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 ATP5G3P48201 142 aa3.55□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF140P52738 457 aaPredicted RBP3.55□□□□□ -1.84
GABPB1-204ENST00000396464 PIGPP57054 158 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms