RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 RHOVQ96L33 236 aa9.66□□□□□ -0.86
GTF2A2-202ENST00000396060 CIB3Q96Q77 187 aaPredicted RBP9.66□□□□□ -0.86
GTF2A2-202ENST00000396060 MRPL20Q9BYC9 149 aaKnown RBP9.66□□□□□ -0.86
GTF2A2-202ENST00000396060 BPESC1Q9GZL8 116 aa9.66□□□□□ -0.86
GTF2A2-202ENST00000396060 FBXL17Q9UF56 701 aa9.66□□□□□ -0.86
GTF2A2-202ENST00000396060 AMMECR1Q9Y4X0 333 aaPredicted RBP9.66□□□□□ -0.86
GTF2A2-202ENST00000396060 IGSF23A1L1A6 192 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 SPDEFO95238 335 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 OR9G9P0C7N8 305 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 HTR2BP41595 481 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 TGIF2LXQ8IUE1 241 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 OR4P4Q8NGL7 312 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 LHX4Q969G2 390 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 SLC25A32Q9H2D1 315 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 RBKSQ9H477 322 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 ZC4H2Q9NQZ6 224 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 TMEM140Q9NV12 185 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 BET1LQ9NYM9 111 aa9.65□□□□□ -0.86
GTF2A2-202ENST00000396060 ARHGAP32A7KAX9 2087 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 IGHV2-70DA0A0C4DH43 119 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 LINC00862A6NCI5 91 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 ODF3BA8MYP8 253 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 FOXH1O75593 365 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 SULT1A1P50225 295 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 RAB13P51153 203 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 SPCS3P61009 180 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 RAB14P61106 215 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 ARF6P62330 175 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 NHLH2Q02577 135 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 OR4A47Q6IF82 309 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 HCP5Q6MZN7 132 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 PUSL1Q8N0Z8 303 aaKnown RBP9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 OR4C13Q8NGP0 309 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 OR4A16Q8NH70 328 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 FAM168AQ92567 244 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 BSCL2Q96G97 398 aaPredicted RBP9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 PIMREGQ9BSJ6 248 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 SIRPDQ9H106 197 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 WFDC1Q9HC57 220 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 TMEM14BQ9NUH8 114 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 ONECUT1Q9UBC0 465 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 FOXA2Q9Y261 457 aaPredicted RBP9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 WASHC3Q9Y3C0 194 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 PTPN13Q12923 2485 aa9.64□□□□□ -0.87
GTF2A2-202ENST00000396060 UPK2O00526 184 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 SCAF4O95104 1147 aaKnown RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 IGKV1-16P04430 117 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 PLA2G2AP14555 144 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 LGALS7P47929 136 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 CAV2P51636 162 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 ATP5J2P56134 94 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 RPL7L1Q6DKI1 246 aaKnown RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 EIF5AL1Q6IS14 154 aaKnown RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 ALKAL2Q6UX46 152 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 TMEM14EPQ6UXP3 125 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 OR8H3Q8N146 312 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 OR4A5Q8NH83 315 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 LRRC20Q8TCA0 184 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 FLYWCH2Q96CP2 140 aaKnown RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 RNF5Q99942 180 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 NARFLQ9H6Q4 476 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 PSENENQ9NZ42 101 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 ZNF257Q9Y2Q1 563 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 TNCP24821 2201 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 WNK2Q9Y3S1 2297 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 BORCS7-ASMTA0A0B4J1R7 106 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 C15orf61A6NNL5 157 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 SRRM4A7MD48 611 aaKnown RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 J3QKU1 62 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 HSPE1P61604 102 aaKnown RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 DIAPH2-AS1Q14236 149 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 HABP2Q14520 560 aaPredicted RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 CLEC2AQ6UVW9 174 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 STX12Q86Y82 276 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 PNKDQ8N490 385 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 GINS3Q9BRX5 216 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 QTRT1Q9BXR0 403 aaKnown RBP9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 FKBP11Q9NYL4 201 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 DPM3Q9P2X0 92 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 PRNDQ9UKY0 176 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 AUP1Q9Y679 476 aa9.63□□□□□ -0.87
GTF2A2-202ENST00000396060 TRAV3A0A0B4J244 114 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 IGHV1-3A0A0C4DH29 117 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 LEUTXA8MZ59 168 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 FGF16O43320 207 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 NMBP08949 121 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 HTR1DP28221 377 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 VDAC2P45880 294 aaPredicted RBP9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 ZNF266Q14584 549 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 VKORC1L1Q8N0U8 176 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 VSTM2AQ8TAG5 236 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 TMEM167AQ8TBQ9 72 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 DTD1Q8TEA8 209 aa9.62□□□□□ -0.87
GTF2A2-202ENST00000396060 INS-IGF2F8WCM5 200 aa9.61□□□□□ -0.87
GTF2A2-202ENST00000396060 SHOXO15266 292 aa9.61□□□□□ -0.87
GTF2A2-202ENST00000396060 DFFBO76075 338 aa9.61□□□□□ -0.87
GTF2A2-202ENST00000396060 KBTBD11O94819 623 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms