RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 SH2D2AQ9NP31 389 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 HSPB7Q9UBY9 170 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 ADAMTS20P59510 1910 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 LINC00473A8K010 186 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 BRWD1-AS2P59051 145 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 KRTCAP3Q53RY4 240 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 ERASQ7Z444 233 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 ABHD12Q8N2K0 398 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 LPAR2Q9HBW0 351 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 ROS1P08922 2347 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 LOC102723996A0A087X1L8 192 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 TMEM210A6NLX4 147 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 SNURFLB1AK76 121 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 C12orf77C9JDV5 145 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 PCP4P48539 62 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
CLIP2-203ENST00000395060 OR1L6Q8NGR2 347 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 APH1AQ96BI3 265 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 FAM122AQ96E09 287 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 WNT10AQ9GZT5 417 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 KCNIP1Q9NZI2 227 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 KIAA1549Q9HCM3 1950 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 KIR2DL5BA0A0G2JN68 375 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 KIR2DL5BA0A0G2JPC4 375 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.97□□□□□ -0.49
CLIP2-203ENST00000395060 FOXH1O75593 365 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 CD1BP29016 333 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 LINC00310P59036 64 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 ZNF497Q6ZNH5 498 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 KIR2DL5AQ8N109 375 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 GALMQ96C23 342 aa11.97□□□□□ -0.49
CLIP2-203ENST00000395060 HEYLQ9NQ87 328 aaPredicted RBP11.97□□□□□ -0.49
CLIP2-203ENST00000395060 HBZP02008 142 aa11.96□□□□□ -0.49
CLIP2-203ENST00000395060 CENPVQ7Z7K6 275 aaPredicted RBP11.96□□□□□ -0.49
CLIP2-203ENST00000395060 OR8I2Q8N0Y5 310 aa11.96□□□□□ -0.49
CLIP2-203ENST00000395060 FAM19A2Q8N3H0 131 aa11.96□□□□□ -0.49
CLIP2-203ENST00000395060 GUCD1Q96NT3 240 aa11.96□□□□□ -0.49
CLIP2-203ENST00000395060 MED13Q9UHV7 2174 aa11.96□□□□□ -0.49
CLIP2-203ENST00000395060 CEP250Q9BV73 2442 aa11.96□□□□□ -0.49
CLIP2-203ENST00000395060 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 FCGR3BO75015 233 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 NTF3P20783 257 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 TPPP2P59282 170 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 MDP1Q86V88 176 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 SAXO1Q8IYX7 474 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 DEFB123Q8N688 67 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 METRNQ9UJH8 293 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 TECTAO75443 2155 aa11.96□□□□□ -0.5
CLIP2-203ENST00000395060 MLNRO43193 412 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 TIMP3P35625 211 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 DCAF10Q5QP82 559 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 TPTE2P1Q5T6R2 138 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 OR5AU1Q8NGC0 362 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 OBP2BQ9NPH6 170 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 YTHDF2Q9Y5A9 579 aaKnown RBP11.95□□□□□ -0.5
CLIP2-203ENST00000395060 C17orf112F2Z3M2 114 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 NEURL1O76050 574 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 TYMSP04818 313 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 OR9G9P0C7N8 305 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 BRS3P32247 399 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 RPL31P62899 125 aaKnown RBP11.95□□□□□ -0.5
CLIP2-203ENST00000395060 IL11RAQ14626 422 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 DOLPP1Q86YN1 238 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 C11orf42Q8N5U0 333 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 SPENQ96T58 3664 aaKnown RBP11.95□□□□□ -0.5
CLIP2-203ENST00000395060 TRAV3A0A0B4J244 114 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 J3QT63 122 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 SIAH2O43255 324 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 PSG7Q13046 419 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 SRSF7Q16629 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLIP2-203ENST00000395060 MRPL54Q6P161 138 aaKnown RBP11.95□□□□□ -0.5
CLIP2-203ENST00000395060 UBALD2Q8IYN6 164 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 NHLRC2Q8NBF2 726 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 LEAP2Q969E1 77 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 WDR54Q9H977 334 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 DCAF16Q9NXF7 216 aa11.95□□□□□ -0.5
CLIP2-203ENST00000395060 C15orf62A8K5M9 175 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 K7EN84 100 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 LHX2P50458 406 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 LCN2P80188 198 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 MAJINQ3KP22 176 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 Q6ZR03 302 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 TMEM144Q7Z5S9 345 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 ZNF645Q8N7E2 425 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 SEPSECSQ9HD40 501 aaKnown RBP11.94□□□□□ -0.5
CLIP2-203ENST00000395060 GCM1Q9NP62 436 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 SERTAD4Q9NUC0 356 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 FOXJ2Q9P0K8 574 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 FBXL7Q9UJT9 491 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 TIMM9Q9Y5J7 89 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 TNCP24821 2201 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 LAMA5O15230 3695 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 TMEM265A0A087WTH1 108 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 VENTXO95231 258 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 HAND1O96004 215 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 GFRA1P56159 465 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 PLGLB1Q02325 96 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms