RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 A0A1B0GW64 132 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 SMCO3A2RU48 225 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 SEC14L6B5MCN3 397 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 CLDN14O95500 239 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 HIST3H2BBQ8N257 126 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 LFNGQ8NES3 379 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 ABHD5Q8WTS1 349 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 HSD17B10Q99714 261 aaKnown RBP11.56□□□□□ -0.56
SNCA-204ENST00000394989 IL19Q9UHD0 177 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 JPT1Q9UK76 154 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 F2RL2O00254 374 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 CYB5R3P00387 301 aaPredicted RBP11.56□□□□□ -0.56
SNCA-204ENST00000394989 CGB3P0DN86 165 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 CGB7P0DN87 165 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 DUTP33316 252 aaKnown RBP11.56□□□□□ -0.56
SNCA-204ENST00000394989 TBR1Q16650 682 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 TMEM14EPQ6UXP3 125 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 C1orf229Q6ZS94 237 aaPredicted RBP11.56□□□□□ -0.56
SNCA-204ENST00000394989 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 GNG12Q9UBI6 72 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 CLN8Q9UBY8 286 aa11.56□□□□□ -0.56
SNCA-204ENST00000394989 IFNA5P01569 189 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 PKIAP61925 76 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 TNFAIP6P98066 277 aaPredicted RBP11.55□□□□□ -0.56
SNCA-204ENST00000394989 C17orf58Q2M2W7 97 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 NUP37Q8NFH4 326 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 HIPK2Q9H2X6 1198 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 DCAF16Q9NXF7 216 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 MARCH11A6NNE9 402 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 YPEL1O60688 119 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 THBDP07204 575 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 STUMQ69YW2 141 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 YPEL2Q96QA6 119 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 OR4C12Q96R67 309 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 IFI27L2Q9H2X8 130 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.55□□□□□ -0.56
SNCA-204ENST00000394989 DOCK11Q5JSL3 2073 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 RBFOX3A6NFN3 312 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 CD55P08174 381 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 RPL39P5Q59GN2 51 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
SNCA-204ENST00000394989 TCF23Q7RTU1 214 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 PPP1R35Q8TAP8 253 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 SNRNP40Q96DI7 357 aaKnown RBP11.55□□□□□ -0.56
SNCA-204ENST00000394989 JKAMPQ9P055 326 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 RNF7Q9UBF6 113 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 ZNF835Q9Y2P0 537 aa11.55□□□□□ -0.56
SNCA-204ENST00000394989 PCNX1Q96RV3 2341 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 DPRXA6NFQ7 191 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 ZFP92A6NM28 416 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 C16orf97H3BN30 126 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 EREGO14944 169 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 RAB29O14966 203 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 ZG16O60844 167 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 GPR12P47775 334 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 RAB11AP62491 216 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 SLC25A24Q6NUK1 477 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 GFRALQ6UXV0 394 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 Q8TCH9 128 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 CALYQ9NYX4 217 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 TLN1Q9Y490 2541 aaKnown RBP11.54□□□□□ -0.56
SNCA-204ENST00000394989 PMS2P5A8MQ11 134 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 PLA2G5P39877 138 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 HBG1P69891 147 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 HBG2P69892 147 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 OR8G2PQ6IF36 304 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 TMEM108Q6UXF1 575 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 SSX7Q7RTT5 188 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 LEAP2Q969E1 77 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 WDR61Q9GZS3 305 aaKnown RBP11.54□□□□□ -0.56
SNCA-204ENST00000394989 KIAA1456Q9P272 454 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 DYSFO75923 2080 aa11.54□□□□□ -0.56
SNCA-204ENST00000394989 TANC2Q9HCD6 1990 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 K7ENP7 123 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 SELENOVP59797 346 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 ZNF726P1Q15940 193 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 H2BFWTQ7Z2G1 175 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 WFDC8Q8IUA0 241 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 DEFB108BQ8NET1 73 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 FAM210BQ96KR6 192 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 NIPSNAP3BQ9BS92 247 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 DPPA3Q6W0C5 159 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 ZCCHC24Q8N2G6 241 aaKnown RBP11.53□□□□□ -0.56
SNCA-204ENST00000394989 ZNF664Q8N3J9 261 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 MALSU1Q96EH3 234 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 ELOVL5Q9NYP7 299 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 IFNA10P01566 189 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 TLE4Q04727 773 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 BSPH1Q075Z2 132 aa11.53□□□□□ -0.56
SNCA-204ENST00000394989 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
SNCA-204ENST00000394989 OR6C3Q9NZP0 311 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms