RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NKX6-1P78426 367 aaPredicted RBP11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 DERL1Q9BUN8 251 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 TMEM147Q9BVK8 224 aa11.19□□□□□ -0.62
GTF2F1-201ENST00000394456 KALRNO60229 2985 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 TMEM210A6NLX4 147 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 MYOD1P15172 320 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNF83P51522 516 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 EDDM3BP56851 147 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 VHLLQ6RSH7 139 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 OR10P1Q8NGE3 313 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 PATZ1Q9HBE1 687 aaKnown RBP11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 ZZEF1O43149 2961 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 PTPRQQ9UMZ3 2332 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 CLDN14O95500 239 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 MSMO1Q15800 293 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNF474Q6S9Z5 364 aaPredicted RBP11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 LAMP3Q9UQV4 416 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 IGF2RP11717 2491 aa11.18□□□□□ -0.62
GTF2F1-201ENST00000394456 SMCO3A2RU48 225 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 FAM90A26D6RGX4 464 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 RRHO14718 337 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 S100PP25815 95 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 PRDX2P32119 198 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 CATR1Q13166 79 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 P2RY6Q15077 328 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 PINX1Q96BK5 328 aaKnown RBP11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 S100PBPQ96BU1 408 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 RHOVQ96L33 236 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 COL25A1Q9BXS0 654 aaPredicted RBP11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 IGLV1-44P01699 117 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 S100A2P29034 98 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 ATP5G3P48201 142 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 TMEM241Q24JQ0 296 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 SDSLQ96GA7 329 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 ABHD17AQ96GS6 310 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 PCGF1Q9BSM1 259 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 HCFC1P51610 2035 aa11.17□□□□□ -0.62
GTF2F1-201ENST00000394456 CTXND1A0A1B0GTU2 59 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 B4DEV8 164 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 SEC14L6B5MCN3 397 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 M0R1X1 148 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 PPP1R2P9O14990 202 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 KBTBD11O94819 623 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 PFN1P07737 140 aaKnown RBP11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 C1orf185Q5T7R7 199 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 ABHD12Q8N2K0 398 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 TMEM170AQ8WVE7 144 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 GNG12Q9UBI6 72 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 NAT8Q9UHE5 227 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 SLC25A15Q9Y619 301 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 M0R1B8 84 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 RAB29O14966 203 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 GCH1P30793 250 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 DUTP33316 252 aaKnown RBP11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 PNRC1Q12796 327 aaPredicted RBP11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 CYP2G1PQ6ZSU1 146 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 CENPVQ7Z7K6 275 aaPredicted RBP11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 WFIKKN1Q96NZ8 548 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 P2RX4Q99571 388 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 OR6C3Q9NZP0 311 aa11.16□□□□□ -0.62
GTF2F1-201ENST00000394456 CHRNA7P36544 502 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 PSMB3P49720 205 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 GAMTQ14353 236 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 ZNF718Q3SXZ3 478 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 PARD6GQ9BYG4 376 aaPredicted RBP11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 PRO1933Q9H354 126 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 TP53TG5Q9Y2B4 290 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 A0A1W2PPQ1 181 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 MKRN2OSH3BPM6 223 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 IFNA1P01562 189 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 CRYABP02511 175 aaKnown RBP11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 HNF1AP20823 631 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 GPR12P47775 334 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 SMIM21Q3B7S5 101 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 C22orf34Q6ZV56 151 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 WASF3Q9UPY6 502 aa11.15□□□□□ -0.62
GTF2F1-201ENST00000394456 NDUFS6O75380 124 aaKnown RBP11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 GYPAP02724 150 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 MOGAT3Q86VF5 341 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 GCSAMQ8N6F7 178 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 ZBTB34Q8NCN2 500 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 SNRNP40Q96DI7 357 aaKnown RBP11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 HIST1H2BLQ99880 126 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 SCNM1Q9BWG6 230 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 SH3BGRL2Q9UJC5 107 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 TIMM9Q9Y5J7 89 aa11.15□□□□□ -0.63
GTF2F1-201ENST00000394456 SPTA1P02549 2419 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms