RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 VASH2Q86V25 355 aa18.33■□□□□ 0.53
CLDND1-202ENST00000394180 DEFB125Q8N687 156 aa18.33■□□□□ 0.53
CLDND1-202ENST00000394180 SCCPDHQ8NBX0 429 aa18.33■□□□□ 0.53
CLDND1-202ENST00000394180 DEFB124Q8NES8 71 aa18.33■□□□□ 0.53
CLDND1-202ENST00000394180 BCL2L2Q92843 193 aaPredicted RBP18.33■□□□□ 0.53
CLDND1-202ENST00000394180 LIN7CQ9NUP9 197 aaKnown RBP18.33■□□□□ 0.53
CLDND1-202ENST00000394180 KNTC1P50748 2209 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 DCHS1Q96JQ0 3298 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 TAX1BP3O14907 124 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 IGKV1-5P01602 117 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 PCSK4Q6UW60 755 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 OR10P1Q8NGE3 313 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 IL19Q9UHD0 177 aa18.33■□□□□ 0.52
CLDND1-202ENST00000394180 PTPRZ1P23471 2315 aaPredicted RBP18.32■□□□□ 0.52
CLDND1-202ENST00000394180 FAM186AA6NE01 2351 aa18.32■□□□□ 0.52
CLDND1-202ENST00000394180 HMGB3O15347 200 aaKnown RBP18.32■□□□□ 0.52
CLDND1-202ENST00000394180 IER3P46695 156 aa18.32■□□□□ 0.52
CLDND1-202ENST00000394180 GFRA1P56159 465 aa18.32■□□□□ 0.52
CLDND1-202ENST00000394180 ASCL5Q7RTU5 278 aa18.32■□□□□ 0.52
CLDND1-202ENST00000394180 LHFPL4Q7Z7J7 247 aa18.32■□□□□ 0.52
CLDND1-202ENST00000394180 OCC1Q8TAD7 63 aa18.32■□□□□ 0.52
CLDND1-202ENST00000394180 PMS2P5A8MQ11 134 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 HLA-DQA1P01909 254 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 HOXC12P31275 282 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 SELENOVP59797 346 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 C1RLQ9NZP8 487 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 TRBV20OR9-2A0A075B6H5 130 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 TRAV34A0A0B4J273 112 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 IGKV1-6A0A0C4DH72 117 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 CORTO00230 105 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 LINC00869P0C866 280 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 CX3CL1P78423 397 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 HTD2P86397 168 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 TBR1Q16650 682 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 VHLLQ6RSH7 139 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 Q6ZVH6 145 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 OR2M3Q8NG83 312 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 C11orf52Q96A22 123 aa18.31■□□□□ 0.52
CLDND1-202ENST00000394180 AKIRIN1Q9H9L7 192 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-202ENST00000394180 FBLP22087 321 aaKnown RBP18.3■□□□□ 0.52
CLDND1-202ENST00000394180 ATP5G3P48201 142 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 KRTAP27-1Q3LI81 207 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 C12orf54Q6X4T0 127 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 MMD2Q8IY49 270 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 ST20Q9HBF5 79 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 PLEK2Q9NYT0 353 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 PSG1P11464 419 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 REG1BP48304 166 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 TGFBR3Q03167 851 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 FAM27BQ5VT28 67 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 OR4A47Q6IF82 309 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 SHISA6Q6ZSJ9 500 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 BATF2Q8N1L9 274 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 OR10G3Q8NGC4 313 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 HES4Q9HCC6 221 aa18.3■□□□□ 0.52
CLDND1-202ENST00000394180 THBS3P49746 956 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 CLDN17P56750 224 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 LINC00596Q86U02 117 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 GPHA2Q96T91 129 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 DERL1Q9BUN8 251 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 CEP250Q9BV73 2442 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 SPAARA0A1B0GVQ0 90 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 IL11RAQ14626 422 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 TMEM136Q6ZRR5 245 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 OR4S2Q8NH73 311 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 ZNF430Q9H8G1 570 aaPredicted RBP18.29■□□□□ 0.52
CLDND1-202ENST00000394180 NAT8BQ9UHF3 227 aa18.29■□□□□ 0.52
CLDND1-202ENST00000394180 TRGV10A0A0A0MS01 117 aa18.28■□□□□ 0.52
CLDND1-202ENST00000394180 C9orf172C9J069 976 aa18.28■□□□□ 0.52
CLDND1-202ENST00000394180 DLL1O00548 723 aa18.28■□□□□ 0.52
CLDND1-202ENST00000394180 FGF12P61328 243 aa18.28■□□□□ 0.52
CLDND1-202ENST00000394180 OR51H1Q8NH63 302 aa18.28■□□□□ 0.52
CLDND1-202ENST00000394180 TSKUQ8WUA8 353 aa18.28■□□□□ 0.52
CLDND1-202ENST00000394180 LOXL2Q9Y4K0 774 aa18.28■□□□□ 0.52
CLDND1-202ENST00000394180 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.27■□□□□ 0.52
CLDND1-202ENST00000394180 DHHO43323 396 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 CD5LO43866 347 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 MPDU1O75352 247 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 CLDN1O95832 211 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 PMCHP20382 165 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 PMP22Q01453 160 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 SMIM21Q3B7S5 101 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 RASL11AQ6T310 242 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 FAM58AQ8N1B3 248 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 OR52L2PQ8NGH6 319 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 ZNF596Q8TC21 504 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 CLEC7AQ9BXN2 247 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 WNT10AQ9GZT5 417 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 RNF24Q9Y225 148 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 ZNF816-ZNF321PA0A0X1KG74 233 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 A0A1W2PNU3 283 aaPredicted RBP18.27■□□□□ 0.52
CLDND1-202ENST00000394180 GAGE12BA1L429 117 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 CRYAAP02489 173 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 SCGB1A1P11684 91 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 TLE1Q04724 770 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 HES3Q5TGS1 186 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 ZNF439Q8NDP4 499 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 OR8B3Q8NGG8 313 aa18.27■□□□□ 0.52
CLDND1-202ENST00000394180 OR8B2Q96RD0 313 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms