RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 TMEM14EPQ6UXP3 125 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 CLDND2Q8NHS1 167 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
CDH16-202ENST00000394055 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 ZNF665Q9H7R5 613 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 IGLV3-9A0A075B6K5 115 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 GZMHP20718 246 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 ZNF134P52741 427 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 SP5Q6BEB4 398 aaPredicted RBP12.19□□□□□ -0.46
CDH16-202ENST00000394055 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 C1QL4Q86Z23 238 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 VKORC1L1Q8N0U8 176 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 DOK5Q9P104 306 aa12.19□□□□□ -0.46
CDH16-202ENST00000394055 BSNQ9UPA5 3926 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 CEBPZOSA8MTT3 80 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 SEC14L6B5MCN3 397 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 CD40P25942 277 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 TNFAIP6P98066 277 aaPredicted RBP12.18□□□□□ -0.46
CDH16-202ENST00000394055 TRAT1Q6PIZ9 186 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 R3HDM4Q96D70 268 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 CUL9Q8IWT3 2517 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 A8MWP6 167 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 IGHV1-46P01743 117 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 HBE1P02100 147 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 DUTP33316 252 aaKnown RBP12.18□□□□□ -0.46
CDH16-202ENST00000394055 KRTCAP3Q53RY4 240 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 ZNF787Q6DD87 383 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 DOLPP1Q86YN1 238 aa12.18□□□□□ -0.46
CDH16-202ENST00000394055 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDH16-202ENST00000394055 RCC1LQ96I51 464 aaKnown RBP12.18□□□□□ -0.46
CDH16-202ENST00000394055 A0A0G2JNJ9 132 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 RAB29O14966 203 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 HMGB3O15347 200 aaKnown RBP12.17□□□□□ -0.46
CDH16-202ENST00000394055 LHBP01229 141 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 OR9G9P0C7N8 305 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 CFHR2P36980 270 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 PDZD11Q5EBL8 140 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 DPPA3Q6W0C5 159 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 WFDC8Q8IUA0 241 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 SVIPQ8NHG7 77 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 QTRT1Q9BXR0 403 aaKnown RBP12.17□□□□□ -0.46
CDH16-202ENST00000394055 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 CALYQ9NYX4 217 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 Q9UFV3 132 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 H3BQ15 152 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 RPS10P46783 165 aaKnown RBP12.17□□□□□ -0.46
CDH16-202ENST00000394055 LOXL3P58215 753 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 SELENOVP59797 346 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 TLE1Q04724 770 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 FAM90A1Q86YD7 464 aa12.17□□□□□ -0.46
CDH16-202ENST00000394055 PHOX2AO14813 284 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 PAX5Q02548 391 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 FOXC1Q12948 553 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 ZCCHC24Q8N2G6 241 aaKnown RBP12.16□□□□□ -0.46
CDH16-202ENST00000394055 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
CDH16-202ENST00000394055 HCFC1P51610 2035 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 DLEU1O43261 78 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 C1orf229Q6ZS94 237 aaPredicted RBP12.16□□□□□ -0.46
CDH16-202ENST00000394055 BEND2Q8NDZ0 799 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 Q8TCH9 128 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 CCL13Q99616 98 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 IFI27L2Q9H2X8 130 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 RNF7Q9UBF6 113 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 ADGRG4Q8IZF6 3080 aa12.16□□□□□ -0.46
CDH16-202ENST00000394055 PRRG2O14669 202 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 GYPAP02724 150 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 RPS23P62266 143 aaKnown RBP12.15□□□□□ -0.46
CDH16-202ENST00000394055 CCL8P80075 99 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 TFF3Q07654 80 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 RHEBQ15382 184 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 KHDC3LQ587J8 217 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 SNRNP40Q96DI7 357 aaKnown RBP12.15□□□□□ -0.46
CDH16-202ENST00000394055 SMDT1Q9H4I9 107 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 PKDREJQ9NTG1 2253 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 LOC102723971A0A1B0GUV8 181 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 ZNF727A8MUV8 499 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 PPP1R2P9O14990 202 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 YPEL1O60688 119 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 NPSP0C0P6 89 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 PRR30Q53SZ7 412 aaPredicted RBP12.15□□□□□ -0.46
CDH16-202ENST00000394055 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 PRAMEF5Q5TYX0 476 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 ZNF429Q86V71 674 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 OR10P1Q8NGE3 313 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 NOL4LQ96MY1 436 aaPredicted RBP12.15□□□□□ -0.46
CDH16-202ENST00000394055 YPEL2Q96QA6 119 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 LAMP3Q9UQV4 416 aa12.15□□□□□ -0.46
CDH16-202ENST00000394055 PMS2P5A8MQ11 134 aa12.15□□□□□ -0.47
CDH16-202ENST00000394055 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.47
CDH16-202ENST00000394055 FGF7P21781 194 aa12.15□□□□□ -0.47
CDH16-202ENST00000394055 RAB11AP62491 216 aa12.15□□□□□ -0.47
CDH16-202ENST00000394055 C17orf58Q2M2W7 97 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms