RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 COA4Q9NYJ1 87 aa10.55□□□□□ -0.72
USP44-202ENST00000393091 IGHG2P01859 326 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 RIPPLY3P57055 190 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 C5orf64Q2M2E5 130 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 THOC7Q6I9Y2 204 aaKnown RBP10.54□□□□□ -0.72
USP44-202ENST00000393091 CUBNO60494 3623 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 SNRPGP15A8MWD9 76 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 CREBL2O60519 120 aaPredicted RBP10.54□□□□□ -0.72
USP44-202ENST00000393091 DUS4LO95620 317 aaKnown RBP10.54□□□□□ -0.72
USP44-202ENST00000393091 IGF1P05019 195 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 NQO2P16083 231 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 HLA-GP17693 338 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 OXA1LQ15070 435 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
USP44-202ENST00000393091 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 SPAG16Q8N0X2 631 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 POC5Q8NA72 575 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 CAPSLQ8WWF8 208 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 RITA1Q96K30 269 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 ZNF702PQ9H963 129 aa10.54□□□□□ -0.72
USP44-202ENST00000393091 TMEM89A2RUT3 159 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 SRRM4A7MD48 611 aaKnown RBP10.53□□□□□ -0.72
USP44-202ENST00000393091 PEX14O75381 377 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 KCNIP3Q9Y2W7 256 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 SIGLEC9Q9Y336 463 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 F8P00451 2351 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 A0A1B0GUS0 222 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 RAMP3O60896 148 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 KBTBD11O94819 623 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 ANXA3P12429 323 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 GLDNQ6ZMI3 551 aaPredicted RBP10.53□□□□□ -0.72
USP44-202ENST00000393091 SELENOHQ8IZQ5 122 aaKnown RBP10.53□□□□□ -0.72
USP44-202ENST00000393091 CHPT1Q8WUD6 406 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 TMEM68Q96MH6 324 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 WNK2Q9Y3S1 2297 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 C9orf170A2RU37 121 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 H2AFB2P0C5Z0 115 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 HKR1P10072 659 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 F2RL1P55085 397 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 SSBP2P81877 361 aaPredicted RBP10.53□□□□□ -0.72
USP44-202ENST00000393091 NRARPQ7Z6K4 114 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 MITD1Q8WV92 249 aa10.53□□□□□ -0.72
USP44-202ENST00000393091 FN1P02751 2386 aaKnown RBP10.52□□□□□ -0.72
USP44-202ENST00000393091 FAM240BA0A1B0GVZ2 78 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 C7orf66A4D0T2 115 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 FCGR3BO75015 233 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 OR4E1P0C645 316 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 LINC00205P59089 165 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 VMA21Q3ZAQ7 101 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 PHLDA2Q53GA4 152 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 ZNF429Q86V71 674 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 PRIMA1Q86XR5 153 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 OR51H1Q8NH63 302 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 WNT10AQ9GZT5 417 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 ZNF257Q9Y2Q1 563 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 ACANP16112 2415 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 CFHR3Q02985 330 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 ZNF562Q6V9R5 426 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 OR52E5Q8NH55 327 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 RBPMSQ93062 196 aaKnown RBP10.52□□□□□ -0.73
USP44-202ENST00000393091 NPFFR1Q9GZQ6 430 aa10.52□□□□□ -0.73
USP44-202ENST00000393091 UPK2O00526 184 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 LPAR6P43657 344 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 NMSQ5H8A3 153 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 RNF152Q8N8N0 203 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 HARBI1Q96MB7 349 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 FOXA2Q9Y261 457 aaPredicted RBP10.51□□□□□ -0.73
USP44-202ENST00000393091 KCNAB3O43448 404 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 OR2A4O95047 310 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 S1PR2O95136 353 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 OR5AC1P0C628 307 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 PPP1R1AQ13522 171 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 PRSS8Q16651 343 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 DRAXINQ8NBI3 349 aaPredicted RBP10.51□□□□□ -0.73
USP44-202ENST00000393091 OR2A7Q96R45 310 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 TMEM14BQ9NUH8 114 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 TNFSF12O43508 249 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 CRYZL1O95825 349 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 LGI3Q8N145 548 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 LHFPL5Q8TAF8 219 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 ENKURQ8TC29 256 aa10.51□□□□□ -0.73
USP44-202ENST00000393091 MARCH11A6NNE9 402 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
USP44-202ENST00000393091 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 SAA1P0DJI8 122 aaPredicted RBP10.5□□□□□ -0.73
USP44-202ENST00000393091 SRSF4Q08170 494 aaKnown RBP10.5□□□□□ -0.73
USP44-202ENST00000393091 DHRS2Q13268 280 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 PPP1R27Q86WC6 154 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 ZNF431Q8TF32 576 aaPredicted RBP10.5□□□□□ -0.73
USP44-202ENST00000393091 R3HDM4Q96D70 268 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 PRSS22Q9GZN4 317 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 KIAA1456Q9P272 454 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 HIVEP2P31629 2446 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 NOTCH2Q04721 2471 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 PITX3O75364 302 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 RELBQ01201 579 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 RGS21Q2M5E4 152 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 OR4A47Q6IF82 309 aa10.5□□□□□ -0.73
USP44-202ENST00000393091 MMD2Q8IY49 270 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms