RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 VENTXO95231 258 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 TMEM54Q969K7 222 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 SFRP2Q96HF1 295 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 OTOFQ9HC10 1997 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 ADRA2AP08913 450 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 OR10S1Q8NGN2 331 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 GATAD1Q8WUU5 269 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 CHRNA10Q9GZZ6 450 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 PLXNB2O15031 1838 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 IGKV1D-43A0A0B4J1Z2 117 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 AREGP15514 252 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 CDCP2Q5VXM1 449 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 ATRAIDQ6UW56 229 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 DNASE2BQ8WZ79 361 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 TMEM74BQ9NUR3 256 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 ZDHHC8Q9ULC8 765 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 LTBP4Q8N2S1 1624 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 UCP1P25874 307 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
LCA5-202ENST00000392959 ARHGEF17Q96PE2 2063 aaPredicted RBP11.19□□□□□ -0.62
LCA5-202ENST00000392959 TRBV9A0A0B4J1U6 114 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 NKX2-8O15522 239 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 FABP2P12104 132 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 GCHFRP30047 84 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
LCA5-202ENST00000392959 AICDAQ9GZX7 198 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 TMEM238LA0A1B0GVL6 79 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 A6NJY4 79 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 ID1P41134 155 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 LOXL3P58215 753 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 LINC00114Q6XXX2 140 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 VKORC1L1Q8N0U8 176 aa11.19□□□□□ -0.62
LCA5-202ENST00000392959 COL5A3P25940 1745 aaPredicted RBP11.19□□□□□ -0.62
LCA5-202ENST00000392959 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 A0A1W2PR77 199 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 J3QW42 95 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 CCL21O00585 134 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 NDUFA2O43678 99 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 FCGR2BP31994 310 aaPredicted RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 OTX1P32242 354 aaPredicted RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 BTCP35070 178 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 C2orf83Q53S99 150 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 CYP2G1PQ6ZSU1 146 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 REC114Q7Z4M0 266 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 OR4C13Q8NGP0 309 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 SGK494Q96LW2 274 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 CBLN1P23435 193 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 RTBDNQ9BSG5 229 aaPredicted RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 hCG_38984A0A1B0GV85 526 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 RRHO14718 337 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 ATP5IP56385 69 aaPredicted RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 RSPO4Q2I0M5 234 aaPredicted RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 TIAF1O95411 115 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 LCN2P80188 198 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 NEU1Q99519 415 aa11.18□□□□□ -0.62
LCA5-202ENST00000392959 COL11A1P12107 1806 aaPredicted RBP11.18□□□□□ -0.62
LCA5-202ENST00000392959 GCSHP23434 173 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 PLP1P60201 277 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 OR10AG1Q8NH19 301 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 SSBP3Q9BWW4 388 aaPredicted RBP11.17□□□□□ -0.62
LCA5-202ENST00000392959 PARD6GQ9BYG4 376 aaPredicted RBP11.17□□□□□ -0.62
LCA5-202ENST00000392959 ZNF729A6NN14 1252 aaPredicted RBP11.17□□□□□ -0.62
LCA5-202ENST00000392959 TGFBR3LH3BV60 316 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 TBX6O95947 436 aaPredicted RBP11.17□□□□□ -0.62
LCA5-202ENST00000392959 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
LCA5-202ENST00000392959 C16orf92Q96LL3 132 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 TMEM70Q9BUB7 260 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
LCA5-202ENST00000392959 IGKV3D-11A0A0A0MRZ8 115 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 ZNF146Q15072 292 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 LINC00470Q9BZP3 86 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 A0A1B0GTI1 187 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 MFAP4P55083 255 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 TMEM30BQ3MIR4 351 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 SHISA5Q8N114 240 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 OR9G1Q8NH87 305 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 TMEM171Q8WVE6 324 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 TMEM56-RWDD3S4R434 201 aa11.17□□□□□ -0.62
LCA5-202ENST00000392959 ANKRD31Q8N7Z5 1873 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 H3BTX0 84 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 TCF24Q7RTU0 167 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 ATOH7Q8N100 152 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 OR10J6PQ8NGY7 276 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms