RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GFRA1P56159 465 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 FMC1Q96HJ9 113 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 HYAL3O43820 417 aaPredicted RBP12.78□□□□□ -0.36
CCDC50-201ENST00000392455 NDUFB4O95168 129 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 MPZL1O95297 269 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 CD1AP06126 327 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 RGP1Q92546 391 aaPredicted RBP12.78□□□□□ -0.36
CCDC50-201ENST00000392455 RPL32P62910 135 aaKnown RBP12.78□□□□□ -0.36
CCDC50-201ENST00000392455 PCNX1Q96RV3 2341 aa12.78□□□□□ -0.36
CCDC50-201ENST00000392455 A0A1W2PRD5 423 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 A0A1W2PRF3 423 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 A0A1W2PRM7 423 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 EFNB2P52799 333 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 ZNF818PQ6ZRF7 136 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 CBLN2Q8IUK8 224 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 PPIAL4EA0A075B759 164 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 PPIAL4DF5H284 164 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 PPIAL4FP0DN26 164 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 GGACTQ9BVM4 153 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 TMEM106BQ9NUM4 274 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 PPIAL4AQ9Y536 164 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 PGPA6NDG6 321 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 SCGB3A1Q96QR1 104 aa12.77□□□□□ -0.36
CCDC50-201ENST00000392455 SIGLEC5O15389 551 aa12.77□□□□□ -0.37
CCDC50-201ENST00000392455 C16orf47Q6ZP98 133 aaPredicted RBP12.77□□□□□ -0.37
CCDC50-201ENST00000392455 SOX8P57073 446 aa12.77□□□□□ -0.37
CCDC50-201ENST00000392455 SYNGR3O43761 229 aa12.77□□□□□ -0.37
CCDC50-201ENST00000392455 FAM219BQ5XKK7 198 aa12.77□□□□□ -0.37
CCDC50-201ENST00000392455 INSL4Q14641 139 aa12.77□□□□□ -0.37
CCDC50-201ENST00000392455 HOGA1Q86XE5 327 aa12.77□□□□□ -0.37
CCDC50-201ENST00000392455 MGST3O14880 152 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 IFI27P40305 119 aaPredicted RBP12.76□□□□□ -0.37
CCDC50-201ENST00000392455 LHFPL4Q7Z7J7 247 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 SRIP30626 198 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 KIAA1644Q3SXP7 199 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 RIPPLY2Q5TAB7 128 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 C9orf62Q8N4C0 152 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 COX6B1P14854 86 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 OGG1O15527 345 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
CCDC50-201ENST00000392455 NKX2-6A6NCS4 301 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 ADRA2AP08913 450 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 SELENOPP49908 381 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 CT55Q8WUE5 264 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 A0A1B0GUT8 65 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 CELA2BP08218 269 aaPredicted RBP12.76□□□□□ -0.37
CCDC50-201ENST00000392455 GPR6P46095 362 aaPredicted RBP12.76□□□□□ -0.37
CCDC50-201ENST00000392455 GLIPR1P48060 266 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 DCTN5Q9BTE1 182 aa12.76□□□□□ -0.37
CCDC50-201ENST00000392455 RPP25Q9BUL9 199 aaKnown RBP12.76□□□□□ -0.37
CCDC50-201ENST00000392455 MED19A0JLT2 244 aaPredicted RBP12.75□□□□□ -0.37
CCDC50-201ENST00000392455 GAGE2BQ13066 116 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 GAGE2EQ4V326 116 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 AMER3Q8N944 861 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 GAGE2DQ9UEU5 116 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 WDR81Q562E7 1941 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 TNFSF14O43557 240 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 CMC4P56277 68 aaPredicted RBP12.75□□□□□ -0.37
CCDC50-201ENST00000392455 SRSF12Q8WXF0 261 aaKnown RBP12.75□□□□□ -0.37
CCDC50-201ENST00000392455 NPIPB4C9JG80 1138 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 MYOD1P15172 320 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 CTSSP25774 331 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 GGTLC2Q14390 218 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 IGHV1OR21-1A0A087WYE8 117 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 APOMO95445 188 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 ORMDL3Q8N138 153 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
CCDC50-201ENST00000392455 TIMM23BQ5SRD1 257 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 ORAOV1Q8WV07 137 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 IL36RNQ9UBH0 155 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 A8MWV9 139 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 PATE4P0C8F1 98 aa12.75□□□□□ -0.37
CCDC50-201ENST00000392455 RBBP6Q7Z6E9 1792 aaKnown RBP12.74□□□□□ -0.37
CCDC50-201ENST00000392455 CIARTQ8N365 385 aaPredicted RBP12.74□□□□□ -0.37
CCDC50-201ENST00000392455 C17orf47Q8NEP4 570 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 CLDN14O95500 239 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 NEU1Q99519 415 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 PPBPP02775 128 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 SLC25A38Q96DW6 304 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 NPCDR1Q9BY65 106 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 POC1AQ8NBT0 407 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 RPRMQ9NS64 109 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 ELOVL5Q9NYP7 299 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 ARL14EPLP0DKL9 152 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 SPINK2P20155 84 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 FAM74A4Q5TZK3 123 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 FAM216AQ8WUB2 273 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 TMEM222Q9H0R3 208 aa12.74□□□□□ -0.37
CCDC50-201ENST00000392455 PSMB11A5LHX3 300 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 FBXW9Q5XUX1 488 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 PCGF1Q9BSM1 259 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.73□□□□□ -0.37
CCDC50-201ENST00000392455 C3AR1Q16581 482 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 LINC01555Q8NAE3 123 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 TRAV8-6A0A0B4J262 113 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 CDIPTO14735 213 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 PTGDSP41222 190 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms