RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 STMN3Q9NZ72 180 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 SNX24Q9Y343 169 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 LHFPL6Q9Y693 200 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 MEGF8Q7Z7M0 2845 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 SCAF11Q99590 1463 aaKnown RBP-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 DSCAMO60469 2012 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 NPATQ14207 1427 aa-0.04□□□□□ -2.42
SNORD28B-201ENST00000390993 EXPH5Q8NEV8 1989 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 TONSLQ96HA7 1378 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 TRBV10-2A0A0K0K1G8 114 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 IRGMA1A4Y4 181 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 OR6C6A6NF89 314 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 F5H5K5 113 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 GOLGA6L19H0YKK7 550 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 NOS1APO75052 506 aaPredicted RBP-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 OR5F1O95221 314 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 LDOC1O95751 146 aaPredicted RBP-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 HLA-DQB2P05538 268 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 RNASE3P12724 160 aaKnown RBP-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 PVALBP20472 110 aaPredicted RBP-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 PTNP21246 168 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 ZNF93P35789 620 aaPredicted RBP-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 FXYD2P54710 66 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 H2BFSP57053 126 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 SPINK7P58062 85 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 OR4D2P58180 307 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 SNAP25P60880 206 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 RAB8AP61006 207 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 UBE2IP63279 158 aaKnown RBP-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 ZNF345Q14585 488 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 KCNJ8Q15842 424 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 ACSM3Q53FZ2 586 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 SPINK9Q5DT21 86 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 OR10J3Q5JRS4 329 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 AHSA2Q719I0 299 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 SPATA24Q86W54 205 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 TBC1D19Q8N5T2 526 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 ZNF676Q8N7Q3 588 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 OR5AK3PQ8NH89 298 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM208Q9BTX3 173 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 TTTY13Q9BZ97 58 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 NDEL1Q9GZM8 345 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 METTL9Q9H1A3 318 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 RP1P56715 2156 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 SNRNP200O75643 2136 aaKnown RBP-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 NAV1Q8NEY1 1877 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 SMARCA4P51532 1647 aa-0.05□□□□□ -2.42
SNORD28B-201ENST00000390993 SYNE1Q8NF91 8797 aaKnown RBP-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 PHLPP2Q6ZVD8 1323 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 TMEM269A0A1B0GVZ9 245 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 A0A1B0GX12 115 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 C9JCJ5 164 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 M0R381 172 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 LINC00614P0C842 121 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 SULT1A3P0DMM9 295 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 SULT1A4P0DMN0 295 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 DEFA4P12838 97 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 F8A1P23610 371 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 GRPRP30550 384 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 RAB31Q13636 194 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 GNA13Q14344 377 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 NKAIN1Q4KMZ8 207 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 FAM27BQ5VT28 67 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 LCN8Q6JVE9 175 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 RASSF6Q6ZTQ3 369 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 OOSP2Q86WS3 158 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 GKN2Q86XP6 184 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 PHF13Q86YI8 300 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 C1orf174Q8IYL3 243 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 C9orf163Q8N9P6 203 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 WFDC11Q8NEX6 87 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 ATP6V1C2Q8NEY4 427 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 SGMS2Q8NHU3 365 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 OR5P2Q8WZ92 322 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 TOP1MTQ969P6 601 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 ZNF707Q96C28 371 aaPredicted RBP-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 GNB1LQ9BYB4 327 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 RAB1BQ9H0U4 201 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 CISHQ9NSE2 258 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 ACER3Q9NUN7 267 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 PARVAQ9NVD7 372 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 BAIAP2Q9UQB8 552 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 RBM7Q9Y580 266 aaKnown RBP-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 CNTRLQ7Z7A1 2325 aa-0.06□□□□□ -2.42
SNORD28B-201ENST00000390993 MAP3K19Q56UN5 1328 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 TTC41PQ6P2S7 1318 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 CPAMD8Q8IZJ3 1885 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 A0A1B0GW15 77 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 DAPL1A0PJW8 107 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 C5orf49A4QMS7 147 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 METTL15A6NJ78 407 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 K7ERQ8 282 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 M0R2N4 97 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 STX10O60499 249 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 TFPTP0C1Z6 253 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 KDELR1P24390 212 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 CD40LGP29965 261 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 HOXA6P31267 233 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 CSN1S1P47710 185 aa-0.07□□□□□ -2.42
SNORD28B-201ENST00000390993 ATP5J2P56134 94 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms