RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 OOEPA6NGQ2 149 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 A8MWP6 167 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 RRHO14718 337 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 CD1BP29016 333 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 OR5R1Q8NH85 324 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 HEYLQ9NQ87 328 aaPredicted RBP17.48■□□□□ 0.39
COL23A1-201ENST00000390654 TRAPPC1Q9Y5R8 145 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 RBFOX2O43251 390 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL23A1-201ENST00000390654 TIMM8AO60220 97 aaPredicted RBP17.48■□□□□ 0.39
COL23A1-201ENST00000390654 CLDN14O95500 239 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 MBP02144 154 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 P0C879 139 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 FOXF2Q12947 444 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 RPL39P5Q59GN2 51 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 ZNF766Q5HY98 468 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 UTF1Q5T230 341 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 TGIF2LXQ8IUE1 241 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 C11orf53Q8IXP5 236 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 SPRY4Q9C004 299 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 GNG12Q9UBI6 72 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 ARFGEF3Q5TH69 2177 aa17.48■□□□□ 0.39
COL23A1-201ENST00000390654 PIEZO2Q9H5I5 2752 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 ACSF3Q4G176 576 aaPredicted RBP17.47■□□□□ 0.39
COL23A1-201ENST00000390654 PRAMEF5Q5TYX0 476 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 SGMS2Q8NHU3 365 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 IMMP2LQ96T52 175 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 KLF13Q9Y2Y9 288 aaPredicted RBP17.47■□□□□ 0.39
COL23A1-201ENST00000390654 TNCP24821 2201 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 AQP7O14520 342 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 CD46P15529 392 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 ATP6V1FQ16864 119 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 ACTL10Q5JWF8 245 aa17.47■□□□□ 0.39
COL23A1-201ENST00000390654 SLC31A2O15432 143 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 ARL14EPLP0DKL9 152 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 GCH1P30793 250 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 ACOT6Q3I5F7 207 aaPredicted RBP17.46■□□□□ 0.39
COL23A1-201ENST00000390654 CENPVQ7Z7K6 275 aaPredicted RBP17.46■□□□□ 0.39
COL23A1-201ENST00000390654 TRBV20OR9-2A0A075B6H5 130 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 EREGO14944 169 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 CNN1P51911 297 aaKnown RBP17.46■□□□□ 0.39
COL23A1-201ENST00000390654 SOX8P57073 446 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 ZPBPQ9BS86 351 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 PARD6GQ9BYG4 376 aaPredicted RBP17.46■□□□□ 0.39
COL23A1-201ENST00000390654 TPRP12270 2363 aaKnown RBP17.46■□□□□ 0.39
COL23A1-201ENST00000390654 PLCE1Q9P212 2302 aa17.46■□□□□ 0.39
COL23A1-201ENST00000390654 IGHV3OR15-7A0A075B7D8 119 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 C17orf112F2Z3M2 114 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 PROP1O75360 226 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 WNT2P09544 360 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 CD59P13987 128 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 TGIF2LYQ8IUE0 185 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 ANAPC16Q96DE5 110 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 HINT2Q9BX68 163 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 CBLN4Q9NTU7 201 aa17.46■□□□□ 0.38
COL23A1-201ENST00000390654 PTPRZ1P23471 2315 aaPredicted RBP17.46■□□□□ 0.38
COL23A1-201ENST00000390654 SCO2A0A1W2PP80 73 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 PAX5Q02548 391 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 KCNIP4Q6PIL6 250 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 WDR82Q6UXN9 313 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 ACP7Q6ZNF0 438 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 Q8N7P7 452 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 TMEM18Q96B42 140 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 DDA1Q9BW61 102 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 C19orf67A6NJJ6 358 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 M0R1X1 148 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 RAB29O14966 203 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 NKX2-8O15522 239 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 SELLP14151 372 aa17.45■□□□□ 0.38
COL23A1-201ENST00000390654 GPR12P47775 334 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 EIF4EBP1Q13541 118 aaPredicted RBP17.44■□□□□ 0.38
COL23A1-201ENST00000390654 PDLIM3Q53GG5 364 aaPredicted RBP17.44■□□□□ 0.38
COL23A1-201ENST00000390654 KMT2EQ8IZD2 1858 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 SLC17A3O00476 420 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 SPINK4O60575 86 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 GGCTO75223 188 aaKnown RBP17.44■□□□□ 0.38
COL23A1-201ENST00000390654 TEX38Q6PEX7 206 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 CDX4O14627 284 aaPredicted RBP17.44■□□□□ 0.38
COL23A1-201ENST00000390654 MYOD1P15172 320 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 SPATA31B1PQ5VZV4 182 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 CIB3Q96Q77 187 aaPredicted RBP17.44■□□□□ 0.38
COL23A1-201ENST00000390654 MS4A5Q9H3V2 200 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 DUSP13Q9UII6 198 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 PKDREJQ9NTG1 2253 aa17.44■□□□□ 0.38
COL23A1-201ENST00000390654 IQCF6A8MYZ5 107 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 FRMD6-AS1P0C7T7 363 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 VWA1Q6PCB0 445 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 OR4A16Q8NH70 328 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 SLC35E4Q6ICL7 350 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 CD177Q8N6Q3 437 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 Q8TCH9 128 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 LRRC29Q8WV35 223 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 FAM122AQ96E09 287 aa17.43■□□□□ 0.38
COL23A1-201ENST00000390654 ZNF705FA8MVS1 300 aaPredicted RBP17.42■□□□□ 0.38
COL23A1-201ENST00000390654 ZNF705DP0CH99 300 aaPredicted RBP17.42■□□□□ 0.38
COL23A1-201ENST00000390654 ZNF705BP0CI00 300 aaPredicted RBP17.42■□□□□ 0.38
COL23A1-201ENST00000390654 RNASEH2CQ8TDP1 164 aaKnown RBP17.42■□□□□ 0.38
COL23A1-201ENST00000390654 ADGRG4Q8IZF6 3080 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 ACTL6BO94805 426 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 CBLN1P23435 193 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 TAS2R60P59551 318 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms