RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NUBPLQ8TB37 319 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ASZ1Q8WWH4 475 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 C22orf15Q8WYQ4 148 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 MT1LQ93083 61 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 EEF2KMTQ96G04 330 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ZNF714Q96N38 554 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TRNT1Q96Q11 434 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 RBP7Q96R05 134 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 OR2M4Q96R27 311 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 UQCC2Q9BRT2 126 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TMED9Q9BVK6 235 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM147Q9BVK8 224 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 BBS2Q9BXC9 721 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ULBP3Q9BZM4 244 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC5A7Q9GZV3 580 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CCDC68Q9H2F9 335 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 MAT2BQ9NZL9 334 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CCDC59Q9P031 241 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 IFNKQ9P0W0 207 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 UXTQ9UBK9 157 aaPredicted RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 RSL24D1Q9UHA3 163 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 OR52A1Q9UKL2 312 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 FBXW2Q9UKT8 454 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 TBL2Q9Y4P3 447 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ORC6Q9Y5N6 252 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 PEX16Q9Y5Y5 336 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 SPCS1Q9Y6A9 102 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 U3KQV3 271 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 CDK13Q14004 1512 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 ESPL1Q14674 2120 aa-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 RBBP6Q7Z6E9 1792 aaKnown RBP-0.8□□□□□ -2.54
TRAJ28-201ENST00000390509 NUP160Q12769 1436 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TROQ12816 1431 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 NCOA1Q15788 1441 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CASKIN1Q8WXD9 1431 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CADPSQ9ULU8 1353 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MYO3BQ8WXR4 1341 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 KIF16BQ96L93 1317 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 ATMQ13315 3056 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 FXYD6-FXYD2A0A087WZ82 144 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TRAV8-3A0A0A6YYJ7 113 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A0U1RQV5 110 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 HMGB1P1B2RPK0 211 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 J3KRW8 73 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 K7ERQ8 282 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 NDUFAB1O14561 156 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 ZZEF1O43149 2961 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 STX6O43752 255 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 VPS26AO75436 327 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 STK16O75716 305 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 OR7C1O76099 320 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM50AO95807 157 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 NCR2O95944 276 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 AGR2O95994 175 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 DHFRP00374 187 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 IGF2P01344 180 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 APODP05090 189 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 OR5AL1P0C617 328 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 FAM228BP0C875 321 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 SULT1A3P0DMM9 295 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 SULT1A4P0DMN0 295 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MCF2P10911 925 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 ZNF24P17028 368 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 HLA-DPA1P20036 260 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TAC1P20366 129 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 IL11P20809 199 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CDK2P24941 298 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 OR1E2P47887 323 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 EIF2B2P49770 351 aaKnown RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 PPT1P50897 306 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 AKR1D1P51857 326 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MP68P56378 58 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB25P57735 213 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB2AP61019 212 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 SUPT4H1P63272 117 aaKnown RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC35A1P78382 337 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 HLA-DRB3P79483 266 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 IL24Q13007 206 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TFDP2Q14188 446 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TRAM2Q15035 370 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 MEP1BQ16820 701 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 TBC1D28Q2M2D7 210 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 KRTAP19-5Q3LI72 72 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 C10orf62Q5T681 223 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CAVIN1Q6NZI2 390 aaKnown RBP-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 BLOC1S2Q6QNY1 142 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 PLEKHG7Q6ZR37 379 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 C4orf50Q6ZRC1 276 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 ERASQ7Z444 233 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 LUZP2Q86TE4 346 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 METTL23Q86XA0 190 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 C10orf107Q8IVU9 208 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 Q8IYB0 196 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 BOD1L2Q8IYS8 172 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 SYCP3Q8IZU3 236 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 CPXCR1Q8N123 301 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 OR8H2Q8N162 312 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 Q8N402 240 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 C9orf62Q8N4C0 152 aa-0.81□□□□□ -2.54
TRAJ28-201ENST00000390509 NKAIN3Q8N8D7 197 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms