RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 SMCR5Q8TEV8 140 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 RAB2BQ8WUD1 216 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 NMNAT3Q96T66 252 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 PARD6GQ9BYG4 376 aaPredicted RBP1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 CXCL16Q9H2A7 254 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 CCL26Q9Y258 94 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 ANGPT4Q9Y264 503 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 ZNF337Q9Y3M9 751 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 MMACHCQ9Y4U1 282 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 PXMP4Q9Y6I8 212 aa1.38□□□□□ -2.19
TRAJ40-201ENST00000390497 ABCC12Q96J65 1359 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 DICER1Q9UPY3 1922 aaKnown RBP1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 TRGV5A0A0B4J1U4 118 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 TRGV4A0A0C4DH28 118 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 MUC21A0A0G2JKD1 596 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 MUC21A0A140T8X8 626 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 A0A1W2PQD3 144 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 A0A1W2PQL4 384 aaPredicted RBP1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 PSMD12O00232 456 aaPredicted RBP1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 BHLHE40O14503 412 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 GNRH2O43555 120 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 CCL1P22362 96 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 PSMB8P28062 276 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 MAP2K4P45985 399 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 IDH3GP51553 393 aaPredicted RBP1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 FXYD7P58549 80 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 POLR2GP62487 172 aaKnown RBP eCLIP1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 ZNF90Q03938 601 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 FADDQ13158 208 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 FAM201AQ5SY85 155 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 GLT8D1Q68CQ7 371 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 SPATA12Q7Z6I5 190 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 TRAPPC5Q8IUR0 188 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 ZNF565Q8N9K5 539 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 ZNF675Q8TD23 568 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 ZCCHC13Q8WW36 166 aaKnown RBP1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 SLC35B4Q969S0 331 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 Q9BRP9 147 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 TMEM106BQ9NUM4 274 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 NDUFB11Q9NX14 153 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 VPS29Q9UBQ0 182 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 RSL24D1Q9UHA3 163 aaKnown RBP1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 PRELID1Q9Y255 219 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 MINOS1-NBL1R4GNA1 71 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 SHANK3Q9BYB0 1731 aa1.37□□□□□ -2.19
TRAJ40-201ENST00000390497 PQLC2LA1A4F0 135 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 C11orf86A6NJI1 115 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 C3orf84H3BNL1 204 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 LST1O00453 97 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 ZNF728P0DKX0 622 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 KCNE1P15382 129 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 ALOX5APP20292 161 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 CA5AP35218 305 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 HINT1P49773 126 aaPredicted RBP1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 PSME3P61289 254 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 TNFAIP6P98066 277 aaPredicted RBP1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 PMAIP1Q13794 54 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 MIAQ16674 131 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 ZNF181Q2M3W8 571 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 AKIRIN2Q53H80 203 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 HIST2H3PS2Q5TEC6 136 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 C8orf74Q6P047 294 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 AGTRAPQ6RW13 159 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 SLC35E3Q7Z769 313 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 SLC35F6Q8N357 371 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 TBC1D19Q8N5T2 526 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 OR5J2Q8NH18 312 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 FGF13Q92913 245 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 RNASE6Q93091 150 aaKnown RBP1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 SFRP2Q96HF1 295 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 CNBD2Q96M20 576 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 OR52B2Q96RD2 323 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 PECRQ9BY49 303 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 CXorf21Q9HAI6 301 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 SLC22A13Q9Y226 551 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 COQ4Q9Y3A0 265 aa1.36□□□□□ -2.19
TRAJ40-201ENST00000390497 SHANK1Q9Y566 2161 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 CLDN24A6NM45 220 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 EVPLLA8MZ36 301 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 TMEM114B3SHH9 223 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 EEF1E1-BLOC1S5C9J1V9 151 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 FNDC10F2Z333 226 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 PLA2G10O15496 165 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 ZNF189O75820 626 aaPredicted RBP1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 BPGMP07738 259 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 RPS17P08708 135 aaKnown RBP1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 REG1BP48304 166 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 RAB13P51153 203 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 HIST1H4AP62805 103 aaKnown RBP1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 MRPS15P82914 257 aaKnown RBP1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 IFITM2Q01629 132 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 SAPCD1Q5SSQ6 148 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 LYZL1Q6UWQ5 148 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 LRRC25Q8N386 305 aaPredicted RBP1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 CLDN22Q8N7P3 220 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 OR1L8Q8NGR8 309 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 CHMP6Q96FZ7 201 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 OR51V1Q9H2C8 321 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 HHLA3Q9XRX5 114 aa1.35□□□□□ -2.19
TRAJ40-201ENST00000390497 DHX57Q6P158 1386 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms