RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 TRGV3P03979 118 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 CD74P04233 296 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 MST1P26927 711 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 DSCR9P59020 149 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 C11orf42Q8N5U0 333 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 PMCHP20382 165 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 TCL1AP56279 114 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 RUNX1Q01196 453 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 SLC16A13Q7RTY0 426 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 JMJD8Q96S16 334 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 OR5AC2Q9NZP5 309 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 CACNA1HO95180 2353 aa8.68□□□□□ -1.02
PKP4-201ENST00000389757 PLAUP00749 431 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 CLPSP04118 112 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 ATP5IP56385 69 aaPredicted RBP8.67□□□□□ -1.02
PKP4-201ENST00000389757 MRPL30Q8TCC3 161 aaKnown RBP8.67□□□□□ -1.02
PKP4-201ENST00000389757 KRTDAPP60985 99 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 FAM74A3Q4VXF1 159 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 C20orf204Q6ZNR8 217 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 PRNTQ86SH4 94 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 LDLRAD3Q86YD5 345 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 GBGT1Q8N5D6 347 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 OR5AU1Q8NGC0 362 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 FBXL15Q9H469 300 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 A0A0G2JK05 382 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 LYNX1G3V0Z9 82 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 LYNX1P0DP58 116 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 C9orf62Q8N4C0 152 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 ANAPC16Q96DE5 110 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 A0A0G2JNJ9 132 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 MFSD2BA6NFX1 497 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 SNRPCP09234 159 aaKnown RBP8.67□□□□□ -1.02
PKP4-201ENST00000389757 NPPCP23582 126 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 RAB9AP51151 201 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 WDR82Q6UXN9 313 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 NUP37Q8NFH4 326 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 OR4X2Q8NGF9 303 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 Q9UFV3 132 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 TUBD1Q9UJT1 453 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 FOXG1P55316 489 aaPredicted RBP8.67□□□□□ -1.02
PKP4-201ENST00000389757 H1FOOQ8IZA3 346 aaPredicted RBP8.67□□□□□ -1.02
PKP4-201ENST00000389757 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 RSG1Q9BU20 258 aa8.67□□□□□ -1.02
PKP4-201ENST00000389757 MBD3L4A6NDZ8 208 aaPredicted RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 MBD3L3A6NE82 208 aaPredicted RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 MBD3L5A6NJ08 208 aaPredicted RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 IGHG3P01860 377 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 MGPP08493 103 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 CA7P43166 264 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 DEFA6Q01524 100 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 LGALSLQ3ZCW2 172 aaPredicted RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 COX19Q49B96 90 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 MBD3L2Q8NHZ7 208 aaPredicted RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 RAX2Q96IS3 184 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 SEC11CQ9BY50 192 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 LYRM2Q9NU23 88 aaPredicted RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 IL36RNQ9UBH0 155 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 TMSB15BA0A087X1C1 80 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 A0A0G2JLM5 398 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 RPL7P18124 248 aaKnown RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 HIST1H3AP68431 136 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 PEAR1Q5VY43 1037 aaPredicted RBP8.66□□□□□ -1.02
PKP4-201ENST00000389757 MIC13Q5XKP0 118 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 WDFY1Q8IWB7 410 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 DDB2Q92466 427 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 SLC2A8Q9NY64 477 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 MOSP00540 346 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 IGHV1-46P01743 117 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 FABP4P15090 132 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 CCL3L1P16619 93 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 EFNA4P52798 201 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 TMEM187Q14656 261 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 SPANXN1Q5VSR9 72 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 PQLC2Q6ZP29 291 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 FGFBP3Q8TAT2 258 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 TAF15Q92804 592 aaKnown RBP eCLIP8.66□□□□□ -1.02
PKP4-201ENST00000389757 FAM210BQ96KR6 192 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 TMEM204Q9BSN7 226 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 SRD5A3Q9H8P0 318 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 COL6A6A6NMZ7 2263 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 RRN3P1Q2M238 152 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 OR4B1Q8NGF8 309 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 DUX5Q96PT3 197 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 DNAJC4Q9NNZ3 241 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 RALGAPA1Q6GYQ0 2036 aa8.66□□□□□ -1.02
PKP4-201ENST00000389757 NPFFR1Q9GZQ6 430 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 ZNF362Q5T0B9 420 aaPredicted RBP8.65□□□□□ -1.02
PKP4-201ENST00000389757 PLXNA3P51805 1871 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 SNCGO76070 127 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 CCL1P22362 96 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 PI4KAP42356 2102 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 GAS1P54826 345 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 IFITM3Q01628 133 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 HLA-DRB5Q30154 266 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 PPP1R27Q86WC6 154 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 OR10C1Q96KK4 312 aa8.65□□□□□ -1.02
PKP4-201ENST00000389757 TCF20Q9UGU0 1960 aaKnown RBP8.65□□□□□ -1.02
PKP4-201ENST00000389757 ZNF672Q499Z4 452 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms