RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 ZNF429Q86V71 674 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 VKORC1L1Q8N0U8 176 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 RHOVQ96L33 236 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 CLCC1Q96S66 551 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 SPTBN1Q01082 2364 aaKnown RBP20.61■□□□□ 0.89
SHOX2-201ENST00000389589 TMEM218A2RU14 115 aa20.61■□□□□ 0.89
SHOX2-201ENST00000389589 AIFM2Q9BRQ8 373 aa20.61■□□□□ 0.89
SHOX2-201ENST00000389589 SLC35D1Q9NTN3 355 aa20.61■□□□□ 0.89
SHOX2-201ENST00000389589 J3QR06 171 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 PPIHO43447 177 aaKnown RBP20.6■□□□□ 0.89
SHOX2-201ENST00000389589 RUNX1Q01196 453 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 ZNF841Q6ZN19 808 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 FAM213BQ8TBF2 198 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 A0A1W2PPH5 198 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 C1QL1O75973 258 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 SOD3P08294 240 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 FHITP49789 147 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 LRRC75BQ2VPJ9 315 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 OR8G2PQ6IF36 304 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 DPPA3Q6W0C5 159 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 THNSL2Q86YJ6 484 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 OR10X1Q8NGY0 326 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 PINX1Q96BK5 328 aaKnown RBP20.6■□□□□ 0.89
SHOX2-201ENST00000389589 TIMD4Q96H15 378 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 MIOXQ9UGB7 285 aa20.6■□□□□ 0.89
SHOX2-201ENST00000389589 TET2Q6N021 2002 aaPredicted RBP20.59■□□□□ 0.89
SHOX2-201ENST00000389589 IGHV1-8P0DP01 117 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 RPP30P78346 268 aaKnown RBP20.59■□□□□ 0.89
SHOX2-201ENST00000389589 AKR1C8PQ5T2L2 129 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 OR9G1Q8NH87 305 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 RAB1CQ92928 201 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 TMEM186Q96B77 213 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 PSMG3Q9BT73 122 aaPredicted RBP20.59■□□□□ 0.89
SHOX2-201ENST00000389589 NARFLQ9H6Q4 476 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 TREM1Q9NP99 234 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 ZNRD1Q9P1U0 126 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 RELNP78509 3460 aa20.59■□□□□ 0.89
SHOX2-201ENST00000389589 OR4A47Q6IF82 309 aa20.58■□□□□ 0.89
SHOX2-201ENST00000389589 OR10P1Q8NGE3 313 aa20.58■□□□□ 0.89
SHOX2-201ENST00000389589 C15orf61A6NNL5 157 aa20.58■□□□□ 0.88
SHOX2-201ENST00000389589 APOA2P02652 100 aa20.58■□□□□ 0.88
SHOX2-201ENST00000389589 AKR1C1Q04828 323 aa20.58■□□□□ 0.88
SHOX2-201ENST00000389589 OR8B3Q8NGG8 313 aa20.58■□□□□ 0.88
SHOX2-201ENST00000389589 OR8B2Q96RD0 313 aa20.58■□□□□ 0.88
SHOX2-201ENST00000389589 RFNGQ9Y644 331 aa20.58■□□□□ 0.88
SHOX2-201ENST00000389589 PMS2P5A8MQ11 134 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 APOC3P02656 99 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 SRSF3P84103 164 aaKnown RBP20.57■□□□□ 0.88
SHOX2-201ENST00000389589 SPINK9Q5DT21 86 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 AVPI1Q5T686 147 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 LFNGQ8NES3 379 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 OR13D1Q8NGV5 346 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 WDR61Q9GZS3 305 aaKnown RBP20.57■□□□□ 0.88
SHOX2-201ENST00000389589 HIPK2Q9H2X6 1198 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 FOXA2Q9Y261 457 aaPredicted RBP20.57■□□□□ 0.88
SHOX2-201ENST00000389589 TRAV3A0A0B4J244 114 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 SNCAP37840 140 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 GNB2P62879 340 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 NEIL1Q96FI4 390 aaPredicted RBP20.57■□□□□ 0.88
SHOX2-201ENST00000389589 TMEM147Q9BVK8 224 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 MRPL20Q9BYC9 149 aaKnown RBP20.57■□□□□ 0.88
SHOX2-201ENST00000389589 TMEM133Q9H2Q1 129 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 UQCC1Q9NVA1 299 aa20.57■□□□□ 0.88
SHOX2-201ENST00000389589 RNASEK-C17orf49H0YIS7 233 aa20.56■□□□□ 0.88
SHOX2-201ENST00000389589 AGPAT2O15120 278 aa20.56■□□□□ 0.88
SHOX2-201ENST00000389589 PLA2G5P39877 138 aa20.56■□□□□ 0.88
SHOX2-201ENST00000389589 ZNF137PP52743 207 aa20.56■□□□□ 0.88
SHOX2-201ENST00000389589 DVL1P1P54792 670 aaPredicted RBP20.56■□□□□ 0.88
SHOX2-201ENST00000389589 C11orf42Q8N5U0 333 aa20.56■□□□□ 0.88
SHOX2-201ENST00000389589 RBP4P02753 201 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 ARG1P05089 322 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 CD5P06127 495 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 ABHD12Q8N2K0 398 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 OR5AN1Q8NGI8 311 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 C8orf46Q8TAG6 207 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 OSR1Q8TAX0 266 aaPredicted RBP20.55■□□□□ 0.88
SHOX2-201ENST00000389589 TNFRSF14Q92956 283 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 TMEM14BQ9NUH8 114 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 SCO1O75880 301 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 IL3RAP26951 378 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 SERF2P84101 59 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 PUSL1Q8N0Z8 303 aaKnown RBP20.55■□□□□ 0.88
SHOX2-201ENST00000389589 TCF19Q9Y242 345 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 FBXO7Q9Y3I1 522 aa20.55■□□□□ 0.88
SHOX2-201ENST00000389589 IL6RP08887 468 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-201ENST00000389589 VDAC2P45880 294 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-201ENST00000389589 TAF15Q92804 592 aaKnown RBP eCLIP20.54■□□□□ 0.88
SHOX2-201ENST00000389589 TMEM231Q9H6L2 316 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 HEYLQ9NQ87 328 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-201ENST00000389589 PRNDQ9UKY0 176 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 FAM96BQ9Y3D0 163 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 TIMM9Q9Y5J7 89 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 UBE2L5PA0A1B0GUS4 154 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 BTBD17A6NE02 478 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 C15orf62A8K5M9 175 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 H0YJW9 148 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 IGKV1-16P04430 117 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 HSPE1P61604 102 aaKnown RBP20.54■□□□□ 0.88
SHOX2-201ENST00000389589 TLE4Q04727 773 aa20.54■□□□□ 0.88
SHOX2-201ENST00000389589 WDR25Q64LD2 544 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms