RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 RHBDL1O75783 438 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 IL6RP08887 468 aaPredicted RBP11.65□□□□□ -0.54
SDC1-202ENST00000381150 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 PCSK4Q6UW60 755 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 ST6GALNAC6Q969X2 333 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 NPCDR1Q9BY65 106 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 ZNF703Q9H7S9 590 aaPredicted RBP11.65□□□□□ -0.54
SDC1-202ENST00000381150 RNF114Q9Y508 228 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 CCL25O15444 150 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 ACTL6BO94805 426 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 RPL15P61313 204 aaKnown RBP11.64□□□□□ -0.55
SDC1-202ENST00000381150 FGF12P61328 243 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 HOXA4Q00056 320 aaPredicted RBP11.64□□□□□ -0.55
SDC1-202ENST00000381150 HLA-DRB5Q30154 266 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 OR5A2Q8NGI9 324 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 APOBEC3DQ96AK3 386 aaPredicted RBP11.64□□□□□ -0.55
SDC1-202ENST00000381150 UHRF2Q96PU4 802 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 TMEM147Q9BVK8 224 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
SDC1-202ENST00000381150 LCN2P80188 198 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 KRTCAP3Q53RY4 240 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 RFESDQ8TAC1 157 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 ZPBPQ9BS86 351 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 LIN7CQ9NUP9 197 aaKnown RBP11.64□□□□□ -0.55
SDC1-202ENST00000381150 CYB561P49447 251 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 OR2D2Q9H210 308 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 ARRDC1-AS1Q9H2J1 176 aa11.64□□□□□ -0.55
SDC1-202ENST00000381150 SYNGR4O95473 234 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 ARL14EPLP0DKL9 152 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
SDC1-202ENST00000381150 CEBPDP49716 269 aaPredicted RBP11.63□□□□□ -0.55
SDC1-202ENST00000381150 RIPPLY2Q5TAB7 128 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 TMEM42Q69YG0 159 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 SPINK14Q6IE38 97 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 LAMTOR2Q9Y2Q5 125 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 H0Y8G0 127 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 GAGE1Q13065 139 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 DAZAP2Q15038 168 aaPredicted RBP11.63□□□□□ -0.55
SDC1-202ENST00000381150 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
SDC1-202ENST00000381150 ZNF324BQ6AW86 544 aaPredicted RBP11.63□□□□□ -0.55
SDC1-202ENST00000381150 CXorf67Q86X51 503 aaPredicted RBP11.63□□□□□ -0.55
SDC1-202ENST00000381150 NEURL1O76050 574 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 PAFAH1B2P68402 229 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 ASCL4Q6XD76 172 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 H2BFWTQ7Z2G1 175 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 DRAM1Q8N682 238 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 TPRX1Q8N7U7 411 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 TRBV20OR9-2A0A075B6H5 130 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 LNP1A1A4G5 178 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 S1PR2O95136 353 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 TFF1P04155 84 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 BORCS7Q96B45 105 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 LRFN3Q9BTN0 628 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 TP53TG3Q9ULZ0 132 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 M0QZ24 198 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 RAC2P15153 192 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 Q56UQ5 140 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 FAM58AQ8N1B3 248 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 ARL6IP6Q8N6S5 226 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 C20orf144Q9BQM9 153 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 NRN1Q9NPD7 142 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 DLL3Q9NYJ7 618 aa11.62□□□□□ -0.55
SDC1-202ENST00000381150 ODAMA1E959 279 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 A8MXE2 369 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 GDF1P27539 372 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
SDC1-202ENST00000381150 MIC13Q5XKP0 118 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 QTRT1Q9BXR0 403 aaKnown RBP11.61□□□□□ -0.55
SDC1-202ENST00000381150 FGF23Q9GZV9 251 aaPredicted RBP11.61□□□□□ -0.55
SDC1-202ENST00000381150 GNB4Q9HAV0 340 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 TP73-AS1Q9UF72 201 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 TRAV24A0A0B4J272 114 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 VENTXO95231 258 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 TYMSP04818 313 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 GRPP07492 148 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 HEYLQ9NQ87 328 aaPredicted RBP11.61□□□□□ -0.55
SDC1-202ENST00000381150 SPTBN2O15020 2390 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 MRPL33O75394 65 aaKnown RBP11.61□□□□□ -0.55
SDC1-202ENST00000381150 WNT2P09544 360 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 CD59P13987 128 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 PCBD1P61457 104 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 TEX43Q6ZNM6 134 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 NHLRC2Q8NBF2 726 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 ALKBH7Q9BT30 221 aaPredicted RBP11.61□□□□□ -0.55
SDC1-202ENST00000381150 STRADBQ9C0K7 418 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 CLCF1Q9UBD9 225 aa11.61□□□□□ -0.55
SDC1-202ENST00000381150 ANKRD30BLA7E2S9 258 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 SRIP30626 198 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 RPL31P62899 125 aaKnown RBP11.6□□□□□ -0.55
SDC1-202ENST00000381150 VHLLQ6RSH7 139 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 SAXO1Q8IYX7 474 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms