RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ARL16Q0P5N6 197 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 ICAM4Q14773 271 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 WDFY1Q8IWB7 410 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 ZNF525Q8N782 197 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 ZIC4Q8N9L1 334 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 OR2D3Q8NGH3 330 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 YTHDF2Q9Y5A9 579 aaKnown RBP10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 PLXNA4Q9HCM2 1894 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 SHANK1Q9Y566 2161 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 COL8A1P27658 744 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 REG1BP48304 166 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 PRRX1P54821 245 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 FER1L5A0AVI2 2057 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 P01737 135 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 APCSP02743 223 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 SNRPCP09234 159 aaKnown RBP10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 HIST1H1EP10412 219 aaKnown RBP10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 FCER1GP30273 86 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 PTTG1IPP53801 180 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 OR4D5Q8NGN0 318 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 WFIKKN1Q96NZ8 548 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 SLX1AQ9BQ83 275 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 QTRT1Q9BXR0 403 aaKnown RBP10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 SDF2L1Q9HCN8 221 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 CACNA1BQ00975 2339 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 ZNF716A6NP11 495 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 K7ESF4 209 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 WNT9BO14905 357 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 VENTXO95231 258 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 CCL8P80075 99 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 ITLN1Q8WWA0 313 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 CALYQ9NYX4 217 aa10.8□□□□□ -0.68
DNMT3A-204ENST00000380756 SLC35E4Q6ICL7 350 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 NABP1Q96AH0 204 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 CCL13Q99616 98 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 ZNF729A6NN14 1252 aaPredicted RBP10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 ABLIM2Q6H8Q1 611 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 TMEM191AQ9H0A3 160 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 PNRC2Q9NPJ4 139 aaKnown RBP10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 FOXD3Q9UJU5 478 aaPredicted RBP10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 UBE2CO00762 179 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 RPLP1P05386 114 aaKnown RBP10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 VKORC1L1Q8N0U8 176 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 GCSAMQ8N6F7 178 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 ZDHHC16Q969W1 377 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 PERPQ96FX8 193 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 NPCDR1Q9BY65 106 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 DOCK10Q96BY6 2186 aa10.79□□□□□ -0.68
DNMT3A-204ENST00000380756 NCBP2LA6PVI3 153 aaKnown RBP10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 HIST1H1BP16401 226 aaKnown RBP10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 RTP5Q14D33 572 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 PAXXQ9BUH6 204 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 JPT1Q9UK76 154 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 PCNX1Q96RV3 2341 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 SMPD2O60906 423 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 LINC00869P0C866 280 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 ADCYAP1P18509 176 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 NHLH1Q02575 133 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 IBA57Q5T440 356 aaKnown RBP10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 FGFBP3Q8TAT2 258 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 MRPL18Q9H0U6 180 aaKnown RBP10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 OPN3Q9H1Y3 402 aaPredicted RBP10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 ONECUT1Q9UBC0 465 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 COL4A6Q14031 1691 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 LBHQ53QV2 105 aaPredicted RBP10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 REC114Q7Z4M0 266 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 C5orf52A6NGY3 159 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 C17orf98A8MV24 154 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 ISLRO14498 428 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 Q56UQ5 140 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 SPSB4Q96A44 273 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 RNF24Q9Y225 148 aa10.78□□□□□ -0.68
DNMT3A-204ENST00000380756 IGKV1-27A0A075B6S5 117 aa10.77□□□□□ -0.68
DNMT3A-204ENST00000380756 NKX2-8O15522 239 aa10.77□□□□□ -0.68
DNMT3A-204ENST00000380756 HEPN1Q6WQI6 88 aa10.77□□□□□ -0.68
DNMT3A-204ENST00000380756 LEAP2Q969E1 77 aa10.77□□□□□ -0.68
DNMT3A-204ENST00000380756 GRIFINA4D1Z8 144 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 KLF7O75840 302 aaPredicted RBP10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 NEURL1O76050 574 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 FTH1P19P0C7X4 201 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 APELAP0DMC3 54 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 FOLR2P14207 255 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 SFRP2Q96HF1 295 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 SLC25A10Q9UBX3 287 aaPredicted RBP10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 PLXNA2O75051 1894 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 CEACAM18A8MTB9 384 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 CRYBB3P26998 211 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 DNM1P46Q6ZS02 220 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 ZDHHC8Q9ULC8 765 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 INSIG2Q9Y5U4 225 aa10.77□□□□□ -0.69
DNMT3A-204ENST00000380756 CBY3A6NI87 242 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNF785A8K8V0 405 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HLA-DQA1P01909 254 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms