RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 CT45A1Q5HYN5 189 aa12.91□□□□□ -0.34
BRF1-203ENST00000379937 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
BRF1-203ENST00000379937 CT45A3Q8NHU0 189 aa12.91□□□□□ -0.34
BRF1-203ENST00000379937 PAGE4O60829 102 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 COX5AP20674 150 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 Q8IYB0 196 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 RCC1LQ96I51 464 aaKnown RBP12.9□□□□□ -0.34
BRF1-203ENST00000379937 ASCL2Q99929 193 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 C1QTNF9BB2RNN3 333 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 ERVK-16P61578 105 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 ZNF726P1Q15940 193 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 SAXO1Q8IYX7 474 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 DERL1Q9BUN8 251 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 RNF7Q9UBF6 113 aa12.9□□□□□ -0.34
BRF1-203ENST00000379937 CYB5BO43169 146 aa12.9□□□□□ -0.35
BRF1-203ENST00000379937 WNT2P09544 360 aa12.9□□□□□ -0.35
BRF1-203ENST00000379937 MORN2Q502X0 79 aa12.9□□□□□ -0.35
BRF1-203ENST00000379937 RPP25LQ8N5L8 163 aaKnown RBP12.9□□□□□ -0.35
BRF1-203ENST00000379937 OR10X1Q8NGY0 326 aa12.9□□□□□ -0.35
BRF1-203ENST00000379937 Q8TCH9 128 aa12.9□□□□□ -0.35
BRF1-203ENST00000379937 PARP11Q9NR21 331 aa12.9□□□□□ -0.35
BRF1-203ENST00000379937 ZFP57Q9NU63 452 aa12.9□□□□□ -0.35
BRF1-203ENST00000379937 TRGV10A0A0A0MS01 117 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
BRF1-203ENST00000379937 NDUFA6P56556 154 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 TBR1Q16650 682 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 STUMQ69YW2 141 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 GSX1Q9H4S2 264 aaPredicted RBP12.89□□□□□ -0.35
BRF1-203ENST00000379937 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.89□□□□□ -0.35
BRF1-203ENST00000379937 TMEM140Q9NV12 185 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 DFFBO76075 338 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 PDLIM3Q53GG5 364 aaPredicted RBP12.89□□□□□ -0.35
BRF1-203ENST00000379937 TIMM23BQ5SRD1 257 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 NHLRC2Q8NBF2 726 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 PBDC1Q9BVG4 233 aa12.89□□□□□ -0.35
BRF1-203ENST00000379937 SLC25A10Q9UBX3 287 aaPredicted RBP12.89□□□□□ -0.35
BRF1-203ENST00000379937 SEC11BP0C7V7 166 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 THBS3P49746 956 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 HBG1P69891 147 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 HBG2P69892 147 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 HFEQ30201 348 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 SPATA31B1PQ5VZV4 182 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 ZNF525Q8N782 197 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 TVP23CQ96ET8 276 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 ATPIF1Q9UII2 106 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 HILPDAQ9Y5L2 63 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 IGHV3OR16-10A0A075B7F0 116 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.88□□□□□ -0.35
BRF1-203ENST00000379937 K7N7A8 449 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 CD82P27701 267 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 GLRXP35754 106 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 ZNF737O75373 536 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 ADIPOQQ15848 244 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 FAM57AQ8TBR7 257 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 SEC11CQ9BY50 192 aa12.88□□□□□ -0.35
BRF1-203ENST00000379937 PITX3O75364 302 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 C1QTNF9P0C862 333 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 MSMO1Q15800 293 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 FAM103A1Q9BTL3 118 aaKnown RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 LAMP3Q9UQV4 416 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 MBD3L4A6NDZ8 208 aaPredicted RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 MBD3L3A6NE82 208 aaPredicted RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 MBD3L5A6NJ08 208 aaPredicted RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 SRRM5B3KS81 715 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 OR8U8P0C7N1 319 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 TAS2R30P59541 319 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 HMGN3Q15651 99 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 MBD3L2Q8NHZ7 208 aaPredicted RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 TAF15Q92804 592 aaKnown RBP eCLIP12.87□□□□□ -0.35
BRF1-203ENST00000379937 SAT2Q96F10 170 aaPredicted RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 RITA1Q96K30 269 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 CISD1Q9NZ45 108 aaKnown RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 COL27A1Q8IZC6 1860 aaPredicted RBP12.87□□□□□ -0.35
BRF1-203ENST00000379937 A0A1B0GU03 582 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 A0A1W2PPV4 95 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 TNFSF4P23510 183 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 CDKN1AP38936 164 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 RAB13P51153 203 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 UHRF2Q96PU4 802 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 NIPSNAP3BQ9BS92 247 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 GAB2Q9UQC2 676 aa12.87□□□□□ -0.35
BRF1-203ENST00000379937 A0A1W2PPQ1 181 aa12.86□□□□□ -0.35
BRF1-203ENST00000379937 SRRM4A7MD48 611 aaKnown RBP12.86□□□□□ -0.35
BRF1-203ENST00000379937 DUTP33316 252 aaKnown RBP12.86□□□□□ -0.35
BRF1-203ENST00000379937 FAM3BP58499 235 aaPredicted RBP12.86□□□□□ -0.35
BRF1-203ENST00000379937 GFI1BQ5VTD9 330 aa12.86□□□□□ -0.35
BRF1-203ENST00000379937 PNKDQ8N490 385 aa12.86□□□□□ -0.35
BRF1-203ENST00000379937 NANPQ8TBE9 248 aa12.86□□□□□ -0.35
BRF1-203ENST00000379937 CA5BP1Q8WTZ4 195 aa12.86□□□□□ -0.35
BRF1-203ENST00000379937 SMIM7Q9BQ49 75 aa12.86□□□□□ -0.35
BRF1-203ENST00000379937 AGMATQ9BSE5 352 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms