RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 C7orf71A4D174 169 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 IL6RP08887 468 aaPredicted RBP9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 CCL13Q99616 98 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 OR4D5Q8NGN0 318 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 WDR34Q96EX3 536 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 LINC00470Q9BZP3 86 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 FTH1P19P0C7X4 201 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 VSIG10L2P0DP72 767 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 NEU3Q9UQ49 428 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 ZNF385CQ66K41 422 aaPredicted RBP9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 KLK8O60259 260 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 PAGE4O60829 102 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 SMIM6P0DI80 62 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 ZNF831Q5JPB2 1677 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 ADAMTS9Q9P2N4 1935 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 ISG15P05161 165 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 BCL2P10415 239 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 CDKN2AP42771 156 aaKnown RBP9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 HOXA5P20719 270 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 RPS11P62280 158 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 TSPO2Q5TGU0 170 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 PLXNA2O75051 1894 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 RND2P52198 227 aa9.74□□□□□ -0.85
PTCHD1-201ENST00000379361 SPAARA0A1B0GVQ0 90 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 ETHE1O95571 254 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 LIFP15018 202 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 MEF2CQ06413 473 aaPredicted RBP9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 ABHD1Q96SE0 405 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 ANKRD20A5PA0PJZ0 165 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 CEACAM21Q3KPI0 293 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 YAE1D1Q9NRH1 226 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 PRR33A8MZF0 331 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 CD300LDQ6UXZ3 194 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 GVQW1Q8N7I0 195 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 RBKSQ9H477 322 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 TMEM74BQ9NUR3 256 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 UQCR10Q9UDW1 63 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 TCRBV4S1A1TA0A5B7 111 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 RPL36A-HNRNPH2H7BZ11 118 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 EFNB2P52799 333 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 CRYGNQ8WXF5 182 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 TTTY12Q9BZ98 90 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 EDA2RQ9HAV5 297 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 TCF21O43680 179 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 FOLR2P14207 255 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 PGLYRP3Q96LB9 341 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 RNF182Q8N6D2 247 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 SLC25A2Q9BXI2 301 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 MED19A0JLT2 244 aaPredicted RBP9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 LNP1A1A4G5 178 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 S100A7L2Q5SY68 101 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 TYMSP04818 313 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 MYOD1P15172 320 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 FAM216AQ8WUB2 273 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 CLEC7AQ9BXN2 247 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 NPVFQ9HCQ7 196 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 B9A039 149 aa9.73□□□□□ -0.85
PTCHD1-201ENST00000379361 PSG2P11465 335 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 H1FOOQ8IZA3 346 aaPredicted RBP9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 C12orf73Q69YU5 71 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 KCNK7Q9Y2U2 307 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 NKX2-6A6NCS4 301 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 C19orf24Q9BVV8 132 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 FAM209BQ5JX69 171 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 HOXB1P14653 301 aaPredicted RBP9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 STHQ8IWL8 128 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 CD1AP06126 327 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 CCL3P10147 92 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 CTSVO60911 334 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 CEACAM8P31997 349 aaPredicted RBP9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 C17orf47Q8NEP4 570 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 MRPL32Q9BYC8 188 aaKnown RBP9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 FGF9P31371 208 aaPredicted RBP9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 C19orf48Q6RUI8 117 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 OR5A1Q8NGJ0 315 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 SMDT1Q9H4I9 107 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 TMEM160Q9NX00 188 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 ZNF880Q6PDB4 577 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 ATP5LO75964 103 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 RNASE4P34096 147 aaKnown RBP9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 TFF2Q03403 129 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 ELOVL5Q9NYP7 299 aa9.72□□□□□ -0.85
PTCHD1-201ENST00000379361 C9orf50Q5SZB4 431 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 Q6ZNX1 250 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 OR9G1Q8NH87 305 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 OPN3Q9H1Y3 402 aaPredicted RBP9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 DNAJC4Q9NNZ3 241 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 SERGEFQ9UGK8 458 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 PXMP4Q9Y6I8 212 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 IGHV3-72A0A0B4J1Y9 119 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 TSPAN2O60636 221 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 PIGYQ3MUY2 71 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 OR51G1Q8NGK1 321 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 ST3GAL2Q16842 350 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 G6PC2Q9NQR9 355 aa9.71□□□□□ -0.85
PTCHD1-201ENST00000379361 UCP2P55851 309 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms