RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 CDIPTO14735 213 aa11.46□□□□□ -0.57
KIF3A-201ENST00000378735 AREGP15514 252 aa11.46□□□□□ -0.57
KIF3A-201ENST00000378735 LOXL4Q96JB6 756 aa11.46□□□□□ -0.57
KIF3A-201ENST00000378735 VPS25Q9BRG1 176 aa11.46□□□□□ -0.57
KIF3A-201ENST00000378735 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
KIF3A-201ENST00000378735 ARL2-SNX15V9GYD0 113 aa11.46□□□□□ -0.57
KIF3A-201ENST00000378735 MED12Q93074 2177 aa11.46□□□□□ -0.57
KIF3A-201ENST00000378735 TRAV34A0A0B4J273 112 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 A0A1W2PRS3 328 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 ZIC3O60481 467 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 MT-CO2P00403 227 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 LIFP15018 202 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 RPL31P62899 125 aaKnown RBP11.46□□□□□ -0.58
KIF3A-201ENST00000378735 OCIAD2Q56VL3 154 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 PRAMEF20Q5VT98 475 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 VASH2Q86V25 355 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 FAM58AQ8N1B3 248 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 TSKUQ8WUA8 353 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 RCHY1Q96PM5 261 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 SRXN1Q9BYN0 137 aa11.46□□□□□ -0.58
KIF3A-201ENST00000378735 CLDN14O95500 239 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 SELENOVP59797 346 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 ARG2P78540 354 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 ZNF645Q8N7E2 425 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 HES4Q9HCC6 221 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 KCNIP1Q9NZI2 227 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 C19orf25Q9UFG5 118 aaPredicted RBP11.45□□□□□ -0.58
KIF3A-201ENST00000378735 SYNGR1O43759 233 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 AMY1AP04745 511 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 GABRA2P47869 451 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 CEACAM16Q2WEN9 425 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 AAED1Q7RTV5 226 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 WNT10AQ9GZT5 417 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 OSTCQ9NRP0 149 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 GDF9O60383 454 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 G6PCP35575 357 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 CATR1Q13166 79 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 VAMP3Q15836 100 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 GCSAMLQ5JQS6 135 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 ZNF497Q6ZNH5 498 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 SPEM1Q8N4L4 309 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 WDR31Q8NA23 367 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 SCCPDHQ8NBX0 429 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 ZNF439Q8NDP4 499 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 EML6Q6ZMW3 1958 aa11.45□□□□□ -0.58
KIF3A-201ENST00000378735 C15orf62A8K5M9 175 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 H0YJW9 148 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 EDDM3BP56851 147 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 EIF4EBP1Q13541 118 aaPredicted RBP11.44□□□□□ -0.58
KIF3A-201ENST00000378735 PKIBQ9C010 78 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
KIF3A-201ENST00000378735 A0A1W2PR77 199 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 ZNF716A6NP11 495 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 LINC00869P0C866 280 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 NTF4P34130 210 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 TBR1Q16650 682 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 Q6ZVH6 145 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 MRPL21Q7Z2W9 205 aaKnown RBP11.44□□□□□ -0.58
KIF3A-201ENST00000378735 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
KIF3A-201ENST00000378735 MBNL3Q9NUK0 354 aaKnown RBP11.44□□□□□ -0.58
KIF3A-201ENST00000378735 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
KIF3A-201ENST00000378735 CBY3A6NI87 242 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 BMPR1BO00238 502 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 CYC1P08574 325 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 FRMD6-AS1P0C7T7 363 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 SRIP30626 198 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 Q6P435 159 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 ZDHHC16Q969W1 377 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
KIF3A-201ENST00000378735 J3QR06 171 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 GCHFRP30047 84 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 RASL11AQ6T310 242 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 CDX2Q99626 313 aaPredicted RBP11.43□□□□□ -0.58
KIF3A-201ENST00000378735 USP34Q70CQ2 3546 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 G3V3Y1 287 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 RAMP3O60896 148 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 TOX4O94842 621 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 TMPRSS3P57727 454 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 OR2D2Q9H210 308 aa11.43□□□□□ -0.58
KIF3A-201ENST00000378735 SS18L1O75177 396 aaPredicted RBP11.42□□□□□ -0.58
KIF3A-201ENST00000378735 SPATA46Q5T0L3 261 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 H2BFWTQ7Z2G1 175 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 CRIM1Q9NZV1 1036 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 TRAPPC2LQ9UL33 140 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 GTF3C1Q12789 2109 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 ZNF891A8MT65 544 aaPredicted RBP11.42□□□□□ -0.58
KIF3A-201ENST00000378735 M0QZ24 198 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 PDLIM3Q53GG5 364 aaPredicted RBP11.42□□□□□ -0.58
KIF3A-201ENST00000378735 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 UBALD2Q8IYN6 164 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 OR8B3Q8NGG8 313 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 SMIM12Q96EX1 92 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 OR8B2Q96RD0 313 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 ABCA7Q8IZY2 2146 aa11.42□□□□□ -0.58
KIF3A-201ENST00000378735 RRHO14718 337 aa11.41□□□□□ -0.58
KIF3A-201ENST00000378735 CLDN18P56856 261 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms