RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CX3CL1P78423 397 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 PLGLAQ15195 96 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 MRGPRG-AS1Q2M3A8 158 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 VMA21Q3ZAQ7 101 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 ZNF562Q6V9R5 426 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 IDO2Q6ZQW0 420 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 TBC1D26Q86UD7 250 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 PPP1R27Q86WC6 154 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 FOXRED2Q8IWF2 684 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 POC5Q8NA72 575 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 OR51J1Q9H342 316 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 TPSG1Q9NRR2 321 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 MCUBQ9NWR8 336 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 GPR132Q9UNW8 380 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 AP4M1O00189 453 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 PI3P19957 117 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 SRSF4Q08170 494 aaKnown RBP14.77□□□□□ -0.05
SSU72-203ENST00000378725 ZNF585BQ52M93 769 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 TRIQKQ629K1 86 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 ZNF57Q68EA5 555 aaPredicted RBP14.77□□□□□ -0.05
SSU72-203ENST00000378725 CENPVQ7Z7K6 275 aaPredicted RBP14.77□□□□□ -0.05
SSU72-203ENST00000378725 STPG2Q8N412 459 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 CHPT1Q8WUD6 406 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 NOL4LQ96MY1 436 aaPredicted RBP14.77□□□□□ -0.05
SSU72-203ENST00000378725 AIFM2Q9BRQ8 373 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 RTBDNQ9BSG5 229 aaPredicted RBP14.77□□□□□ -0.05
SSU72-203ENST00000378725 PLEKHA2Q9HB19 425 aa14.77□□□□□ -0.05
SSU72-203ENST00000378725 HRASP01112 189 aa14.76□□□□□ -0.05
SSU72-203ENST00000378725 SAA1P0DJI8 122 aaPredicted RBP14.76□□□□□ -0.05
SSU72-203ENST00000378725 IL7P13232 177 aa14.76□□□□□ -0.05
SSU72-203ENST00000378725 PIGPP57054 158 aa14.76□□□□□ -0.05
SSU72-203ENST00000378725 TAS2R31P59538 309 aa14.76□□□□□ -0.05
SSU72-203ENST00000378725 POU2AF1Q16633 256 aa14.76□□□□□ -0.05
SSU72-203ENST00000378725 PUSL1Q8N0Z8 303 aaKnown RBP14.76□□□□□ -0.05
SSU72-203ENST00000378725 CLCC1Q96S66 551 aa14.76□□□□□ -0.05
SSU72-203ENST00000378725 CA2P00918 260 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 EGR2P11161 476 aaPredicted RBP14.75□□□□□ -0.05
SSU72-203ENST00000378725 CRIP2P52943 208 aaPredicted RBP14.75□□□□□ -0.05
SSU72-203ENST00000378725 PJVKQ0ZLH3 352 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 PRSS8Q16651 343 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 VKORC1L1Q8N0U8 176 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 OR5AU1Q8NGC0 362 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 RHOVQ96L33 236 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 SCGB3A2Q96PL1 93 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 CCDC32Q9BV29 185 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 C5orf66Q9H5L9 145 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 COMMD9Q9P000 198 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 LINC00527Q9UJ94 153 aa14.75□□□□□ -0.05
SSU72-203ENST00000378725 NAP1L6A6NFF2 107 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 ARPC1BO15143 372 aaKnown RBP14.74□□□□□ -0.05
SSU72-203ENST00000378725 OR2A4O95047 310 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 IL6RP08887 468 aaPredicted RBP14.74□□□□□ -0.05
SSU72-203ENST00000378725 NQO2P16083 231 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 CD40LGP29965 261 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 LPAR6P43657 344 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 INPP1P49441 399 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 SSBP2P81877 361 aaPredicted RBP14.74□□□□□ -0.05
SSU72-203ENST00000378725 NDPQ00604 133 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 CADM3Q8N126 398 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 CCDC71LQ8N9Z2 235 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 VSTM2AQ8TAG5 236 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 OR2A7Q96R45 310 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 GON7Q9BXV9 100 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 COPZ2Q9P299 210 aa14.74□□□□□ -0.05
SSU72-203ENST00000378725 C14orf166Q9Y224 244 aaKnown RBP14.74□□□□□ -0.05
SSU72-203ENST00000378725 PSMB11A5LHX3 300 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 ATP6V0E1O15342 81 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 S1PR2O95136 353 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 CFHR3Q02985 330 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 FXYD3Q14802 87 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 C10orf99Q6UWK7 81 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 TMEM167AQ8TBQ9 72 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 SLC25A21Q9BQT8 299 aaPredicted RBP14.73□□□□□ -0.05
SSU72-203ENST00000378725 C7orf50Q9BRJ6 194 aaKnown RBP14.73□□□□□ -0.05
SSU72-203ENST00000378725 PARP11Q9NR21 331 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 BET1LQ9NYM9 111 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 VSIG4Q9Y279 399 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 FBXO7Q9Y3I1 522 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 NUBP2Q9Y5Y2 271 aa14.73□□□□□ -0.05
SSU72-203ENST00000378725 C3orf85A0A1B0GTC6 90 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 H0Y980 276 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 B3GALNT1O75752 331 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 KBTBD11O94819 623 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 CD28P10747 220 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 PPIFP30405 207 aaKnown RBP14.72□□□□□ -0.05
SSU72-203ENST00000378725 CD83Q01151 205 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 ZNF846Q147U1 533 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 C19orf54Q5BKX5 351 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 TCTEX1D4Q5JR98 221 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 ZNF329Q86UD4 541 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 OR4A5Q8NH83 315 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 SGMS2Q8NHU3 365 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 R3HDM4Q96D70 268 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 TP53RKQ96S44 253 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 WDR12Q9GZL7 423 aaKnown RBP14.72□□□□□ -0.05
SSU72-203ENST00000378725 ZNF430Q9H8G1 570 aaPredicted RBP14.72□□□□□ -0.05
SSU72-203ENST00000378725 TENM1Q9UKZ4 2725 aa14.72□□□□□ -0.05
SSU72-203ENST00000378725 G3V318 75 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 PLA2G10O15496 165 aa14.71□□□□□ -0.05
SSU72-203ENST00000378725 CREBL2O60519 120 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms