RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SH3BGRL3Q9H299 93 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 TP53BP1Q12888 1972 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-201ENST00000378156 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 CA2P00918 260 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 REC114Q7Z4M0 266 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-201ENST00000378156 UFC1Q9Y3C8 167 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 RNF115Q9Y4L5 304 aa12.83□□□□□ -0.36
NPHP4-201ENST00000378156 NDUFA2O43678 99 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 FABP2P12104 132 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 OR8A1Q8NGG7 326 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 SPATA45Q537H7 98 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 DGAT2L7PQ6IED9 249 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 SLC25A28Q96A46 364 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 FNDC1Q4ZHG4 1894 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-201ENST00000378156 TMEM187Q14656 261 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 IZUMO4Q1ZYL8 232 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 C17orf82Q86X59 251 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-201ENST00000378156 OR4X1Q8NH49 305 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 COL6A6A6NMZ7 2263 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 TMEM238LA0A1B0GVL6 79 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 A6NJY4 79 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 PGLYRP1O75594 196 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-201ENST00000378156 PLP1P60201 277 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 KCNMB1Q16558 191 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 MRPL13Q9BYD1 178 aaKnown RBP12.82□□□□□ -0.36
NPHP4-201ENST00000378156 MRPL37Q9BZE1 423 aaKnown RBP12.82□□□□□ -0.36
NPHP4-201ENST00000378156 OR51B2Q9Y5P1 312 aa12.82□□□□□ -0.36
NPHP4-201ENST00000378156 APELAP0DMC3 54 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 AREGP15514 252 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 CD1BP29016 333 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 PCP4P48539 62 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 GPR61Q9BZJ8 451 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 NTN3O00634 580 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-201ENST00000378156 SYNGR3O43761 229 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 NPVFQ9HCQ7 196 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 ATXN7O15265 892 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-201ENST00000378156 HIST1H1BP16401 226 aaKnown RBP12.81□□□□□ -0.36
NPHP4-201ENST00000378156 MC5RP33032 325 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 PTGDSP41222 190 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 LY6G6FQ5SQ64 297 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 AURKAIP1Q9NWT8 199 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-201ENST00000378156 CALYQ9NYX4 217 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 MRPS18CQ9Y3D5 142 aaKnown RBP12.81□□□□□ -0.36
NPHP4-201ENST00000378156 A8MXK9 166 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 MTURNQ8N3F0 131 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 Q8WTZ3 238 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 HIST1H2BAQ96A08 127 aa12.81□□□□□ -0.36
NPHP4-201ENST00000378156 NRN1LQ496H8 165 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 SELENOHQ8IZQ5 122 aaKnown RBP12.8□□□□□ -0.36
NPHP4-201ENST00000378156 GPR146Q96CH1 333 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 RTBDNQ9BSG5 229 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-201ENST00000378156 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 CD40P25942 277 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 GLRXP35754 106 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 LEMD1Q68G75 181 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 ZNF645Q8N7E2 425 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 ASCL3Q9NQ33 180 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 hCG_38984A0A1B0GV85 526 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 CSRP1P21291 193 aaKnown RBP12.8□□□□□ -0.36
NPHP4-201ENST00000378156 MDKP21741 143 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-201ENST00000378156 HINT1P49773 126 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-201ENST00000378156 KLRB1Q12918 225 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 ZNF818PQ6ZRF7 136 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 OR5P3Q8WZ94 311 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 ZNF319Q9P2F9 582 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 TCTAP57738 103 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 CLEC2AQ6UVW9 174 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 OR8I2Q8N0Y5 310 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 TTC28Q96AY4 2481 aa12.8□□□□□ -0.36
NPHP4-201ENST00000378156 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
NPHP4-201ENST00000378156 PI4KAP42356 2102 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 FGFRL1Q8N441 504 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 SNRNP40Q96DI7 357 aaKnown RBP12.79□□□□□ -0.36
NPHP4-201ENST00000378156 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
NPHP4-201ENST00000378156 BTF3P20290 206 aaKnown RBP12.79□□□□□ -0.36
NPHP4-201ENST00000378156 CLDN18P56856 261 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 PAQR4Q8N4S7 273 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-201ENST00000378156 RARRES2Q99969 163 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 KCNMB2Q9Y691 235 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 ERASQ7Z444 233 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 ZNF256Q9Y2P7 627 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-201ENST00000378156 NDUFB4O95168 129 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 RPL27AP46776 148 aaKnown RBP12.79□□□□□ -0.36
NPHP4-201ENST00000378156 GGACTQ9BVM4 153 aa12.79□□□□□ -0.36
NPHP4-201ENST00000378156 GBF1Q92538 1859 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 IGLV3-32A0A0A0MS00 114 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 IGHV3-72A0A0B4J1Y9 119 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 IGKV1-9A0A0C4DH69 117 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 CECR9P0C854 216 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 GLIPR1P48060 266 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 FAM27E3Q08E93 113 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 SLC25A34Q6PIV7 304 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 OR10S1Q8NGN2 331 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 TM2D1Q9BX74 207 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms