RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 TRBV6-6A0A0A6YYG2 114 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 TFF1P04155 84 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 TDGF1P13385 188 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 GNG3P63215 75 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 PDLIM3Q53GG5 364 aaPredicted RBP13.28□□□□□ -0.28
CKAP4-201ENST00000378026 Q6P435 159 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 APH1AQ96BI3 265 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 DOCK10Q96BY6 2186 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 IGHV3-43A0A0B4J1X8 118 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 LNP1A1A4G5 178 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 RNF212BA8MTL3 300 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 DEFB108AA8MXU0 73 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 HYPMO75409 117 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 CLDN14O95500 239 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 P04436 131 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 IGHV3-43DP0DP04 118 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 RAC2P15153 192 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 RIPPLY2Q5TAB7 128 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 MRPL14Q6P1L8 145 aaKnown RBP13.28□□□□□ -0.28
CKAP4-201ENST00000378026 MMD2Q8IY49 270 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 C1orf174Q8IYL3 243 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
CKAP4-201ENST00000378026 RNF2Q99496 336 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 PCED1AQ9H1Q7 454 aa13.28□□□□□ -0.28
CKAP4-201ENST00000378026 FXYD3Q14802 87 aa13.27□□□□□ -0.28
CKAP4-201ENST00000378026 LTC4SQ16873 150 aa13.27□□□□□ -0.28
CKAP4-201ENST00000378026 Q8N7P7 452 aa13.27□□□□□ -0.28
CKAP4-201ENST00000378026 Q8N976 141 aa13.27□□□□□ -0.28
CKAP4-201ENST00000378026 ASPHD1Q5U4P2 390 aa13.27□□□□□ -0.29
CKAP4-201ENST00000378026 FAM234AQ9H0X4 552 aa13.27□□□□□ -0.29
CKAP4-201ENST00000378026 UQCR10Q9UDW1 63 aa13.27□□□□□ -0.29
CKAP4-201ENST00000378026 NCKAP5O14513 1909 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 ZNF253O75346 499 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 COX6A1P12074 109 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 GDF1P27539 372 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 LTBRP36941 435 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 BRWD1-AS2P59051 145 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 SPATA31B1PQ5VZV4 182 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 LEMD1Q68G75 181 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 ZNF497Q6ZNH5 498 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 C15orf62A8K5M9 175 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 CEACAM8P31997 349 aaPredicted RBP13.26□□□□□ -0.29
CKAP4-201ENST00000378026 RBX1P62877 108 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 RPEL1Q2QD12 228 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 LCN12Q6JVE5 192 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 TUSC5Q8IXB3 177 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 TPRX1Q8N7U7 411 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 OR2M7Q8NG81 312 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 RFESDQ8TAC1 157 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 SLC45A2Q9UMX9 530 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 DNAJC13O75165 2243 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 CDIPTO14735 213 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 NXPH2O95156 264 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 IGLC2P0DOY2 106 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 IGLC3P0DOY3 106 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 SRD5A2P31213 254 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 LGALS4P56470 323 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 ARL6IP6Q8N6S5 226 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 ZNF645Q8N7E2 425 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 C22orf15Q8WYQ4 148 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 IMMP1LQ96LU5 166 aa13.26□□□□□ -0.29
CKAP4-201ENST00000378026 FOXH1O75593 365 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 NEURL1O76050 574 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 MRPL54Q6P161 138 aaKnown RBP13.25□□□□□ -0.29
CKAP4-201ENST00000378026 DOLPP1Q86YN1 238 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 WDR83OSQ9Y284 106 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 ADAMTS20P59510 1910 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 A8MXE2 369 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 NPIPB11E5RHQ5 1161 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 ESDP10768 282 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 CTRLP40313 264 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 COTL1Q14019 142 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 LINC00596Q86U02 117 aa13.25□□□□□ -0.29
CKAP4-201ENST00000378026 RNASE7Q9H1E1 156 aaKnown RBP13.25□□□□□ -0.29
CKAP4-201ENST00000378026 C3orf79P0CE67 100 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 SRIP30626 198 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 ZNF83P51522 516 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 CXorf67Q86X51 503 aaPredicted RBP13.24□□□□□ -0.29
CKAP4-201ENST00000378026 VKORC1L1Q8N0U8 176 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 KCNE4Q8WWG9 221 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 A0A1W2PS18 150 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 GRPP07492 148 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 AESQ08117 197 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 CATR1Q13166 79 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 SEPSECSQ9HD40 501 aaKnown RBP13.24□□□□□ -0.29
CKAP4-201ENST00000378026 KCNIP1Q9NZI2 227 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 LINC00473A8K010 186 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 DNPH1O43598 174 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 ACTL6BO94805 426 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 Q0VG73 95 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 GALMQ96C23 342 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 MS4A5Q9H3V2 200 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 HEYLQ9NQ87 328 aaPredicted RBP13.24□□□□□ -0.29
CKAP4-201ENST00000378026 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
CKAP4-201ENST00000378026 DPRXA6NFQ7 191 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 IGHV3-13P01766 116 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 IGHV3-7P01780 117 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 OTX2P32243 289 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 GFRA1P56159 465 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 TRIP6Q15654 476 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms