RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 MKRN2OSH3BPM6 223 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 CORTO00230 105 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 OR4A8P0C604 315 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 CSRP1P21291 193 aaKnown RBP7.44□□□□□ -1.22
PCDH9-202ENST00000377865 ADMP35318 185 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 GNB2P62879 340 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 OR10J3Q5JRS4 329 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 TCF19Q9Y242 345 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 NABP1Q96AH0 204 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 VOPP1Q96AW1 172 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF430Q9H8G1 570 aaPredicted RBP7.44□□□□□ -1.22
PCDH9-202ENST00000377865 GNB4Q9HAV0 340 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF355PQ9NSJ1 428 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 TMEM106BQ9NUM4 274 aa7.44□□□□□ -1.22
PCDH9-202ENST00000377865 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 RHBDL1O75783 438 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 MT-CO3P00414 261 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 FCER1GP30273 86 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 CSRP2Q16527 193 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 FOXL2NBQ6ZUU3 175 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 RBM14Q96PK6 669 aaKnown RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 C3orf80F5H4A9 247 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 M0R296 226 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 PRRG2O14669 202 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 FAM87AP0C7U9 286 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 C1orf194Q5T5A4 169 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 WFDC8Q8IUA0 241 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 SCN2AQ99250 2005 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 LINC00869P0C866 280 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 CRYBB3P26998 211 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 TET1Q8NFU7 2136 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 RNASEH2CQ8TDP1 164 aaKnown RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 MESP1Q9BRJ9 268 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 HIGD1AQ9Y241 93 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 SOX21Q9Y651 276 aaPredicted RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 SCO2A0A1W2PP80 73 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 CRYABP02511 175 aaKnown RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 ATP5G3P48201 142 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 DOLPP1Q86YN1 238 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 GP6Q9HCN6 339 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 SLC25A10Q9UBX3 287 aaPredicted RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 HELZP42694 1942 aaKnown RBP7.43□□□□□ -1.22
PCDH9-202ENST00000377865 TRBV6-6A0A0A6YYG2 114 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 AGFG2O95081 481 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 LEPROTL1O95214 131 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 MPV17P39210 176 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 FOXL1Q12952 345 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 TNXAQ16473 311 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 ASCL4Q6XD76 172 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 NABP2Q9BQ15 211 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 FOXJ2Q9P0K8 574 aa7.43□□□□□ -1.22
PCDH9-202ENST00000377865 C9JQL5 133 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 TNFSF13O75888 250 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 WNT5AP41221 380 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 DCAF10Q5QP82 559 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF497Q6ZNH5 498 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 DNAJC4Q9NNZ3 241 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 ASCL3Q9NQ33 180 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 IZUMO1RA6ND01 250 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 HYPMO75409 117 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 IGHV3-13P01766 116 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 IGHV3-7P01780 117 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 MAS1LP35410 378 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 CLDN18P56856 261 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 RPL31P62899 125 aaKnown RBP7.42□□□□□ -1.22
PCDH9-202ENST00000377865 GNB1LQ9BYB4 327 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 IDI2-AS1Q9NZ38 188 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 CSN3P07498 182 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 FXYD3Q14802 87 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 TMEM42Q69YG0 159 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 VWA1Q6PCB0 445 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 SPSB3Q6PJ21 355 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 LYPD6BQ8NI32 183 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 SAP25Q8TEE9 199 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 CALYQ9NYX4 217 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 LOC102723996A0A087X1L8 192 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 TIAF1O95411 115 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 CA2P00918 260 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 CEBPDP49716 269 aaPredicted RBP7.42□□□□□ -1.22
PCDH9-202ENST00000377865 PCSK4Q6UW60 755 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 RPEQ96AT9 228 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 HSPB7Q9UBY9 170 aa7.42□□□□□ -1.22
PCDH9-202ENST00000377865 BMPR1BO00238 502 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 SNRPCP09234 159 aaKnown RBP7.41□□□□□ -1.22
PCDH9-202ENST00000377865 SOX8P57073 446 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 SLC35B1P78383 322 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 GATAD1Q8WUU5 269 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 RASL11BQ9BPW5 248 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 ARRDC1-AS1Q9H2J1 176 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 VSIRQ9H7M9 311 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 IGHV3OR15-7A0A075B7D8 119 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 IGKV1-12A0A0C4DH73 117 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 C12orf77C9JDV5 145 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF207O43670 478 aaKnown RBP7.41□□□□□ -1.22
PCDH9-202ENST00000377865 SERF1AO75920 110 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms