RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 NAV1Q8NEY1 1877 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 UMODP07911 640 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 MYOD1P15172 320 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 FAM106AQ4KMX7 169 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 GATA3P23771 443 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 UBE2L3P68036 154 aaKnown RBP4.18□□□□□ -1.74
PCDH9-201ENST00000377861 CCL4L1Q8NHW4 92 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 BSCL2Q96G97 398 aaPredicted RBP4.18□□□□□ -1.74
PCDH9-201ENST00000377861 KAT6AQ92794 2004 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 LINC01551Q86U37 167 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 MEGF9Q9H1U4 602 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 KLF12Q9Y4X4 402 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 MGST1P10620 155 aaKnown RBP4.18□□□□□ -1.74
PCDH9-201ENST00000377861 RGP1Q92546 391 aaPredicted RBP4.18□□□□□ -1.74
PCDH9-201ENST00000377861 PI3P19957 117 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 IGFBP6P24592 240 aaPredicted RBP4.18□□□□□ -1.74
PCDH9-201ENST00000377861 DLX6P56179 175 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 BATFQ16520 125 aa4.18□□□□□ -1.74
PCDH9-201ENST00000377861 Q6ZVH6 145 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 LRRC37AA6NMS7 1700 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 SRYQ05066 204 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 PVRIGQ6DKI7 326 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 PCSK4Q6UW60 755 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 CLEC1BQ9P126 229 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF835Q9Y2P0 537 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 KLF14Q8TD94 323 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-201ENST00000377861 TRAV14DV4A0A0A6YYC5 116 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 TRGV9Q99603 122 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 ONECUT1Q9UBC0 465 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 SHISA3A0PJX4 238 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 FCGR3BO75015 233 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 MT-CO3P00414 261 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 CSRP2Q16527 193 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 RPRMLQ8N4K4 120 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 GBGT1Q8N5D6 347 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 WNT5BQ9H1J7 359 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF430Q9H8G1 570 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-201ENST00000377861 H0Y8X5 98 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 GUCD1Q96NT3 240 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 CD5LO43866 347 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 ORMDL3Q8N138 153 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF714Q96N38 554 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM14CQ9P0S9 112 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 MYH6P13533 1939 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 WIPF3A6NGB9 483 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 FOXA3P55318 350 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-201ENST00000377861 ZAR1Q86SH2 424 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 IGHV1-69-2A0A0G2JMI3 117 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 SYT8Q8NBV8 401 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 GCHFRP30047 84 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 IFITM10A6NMD0 228 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 RPP25LQ8N5L8 163 aaKnown RBP4.17□□□□□ -1.74
PCDH9-201ENST00000377861 MSL2Q9HCI7 577 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 CA2P00918 260 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 OR1K1Q8NGR3 316 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 GFRA1P56159 465 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 EDDM3BP56851 147 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 TEX38Q6PEX7 206 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 KAAG1Q9UBP8 84 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 PF4V1P10720 104 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 DEFB110Q30KQ9 67 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 HIST3H2BBQ8N257 126 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 OR2H2O95918 312 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 TNFAIP6P98066 277 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-201ENST00000377861 C3AR1Q16581 482 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 WDR25Q64LD2 544 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM177Q53S58 311 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 DRAM1Q8N682 238 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 METAP1P53582 386 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 PRCDQ00LT1 54 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 DPM3Q9P2X0 92 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 HS3ST3B1Q9Y662 390 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 KNL1Q8NG31 2342 aa4.17□□□□□ -1.74
PCDH9-201ENST00000377861 TUBGCP6Q96RT7 1819 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 KRTAP27-1Q3LI81 207 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 SPNS3Q6ZMD2 512 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM14BQ9NUH8 114 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 PSG11Q9UQ72 335 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 LAMB1P07942 1786 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 A0A1W2PNR3 127 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 H0YIZ8 118 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 SS18L1O75177 396 aaPredicted RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 MPZL1O95297 269 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 IGHG3P01860 377 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 SMIM13P0DJ93 91 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 DSCR9P59020 149 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 ORMDL2Q53FV1 153 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 ZIC4Q8N9L1 334 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 PRR18Q8N4B5 295 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 MYH14Q7Z406 1995 aaKnown RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 PPIHO43447 177 aaKnown RBP4.16□□□□□ -1.74
PCDH9-201ENST00000377861 SSC4DQ8WTU2 575 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 EPDR1Q9UM22 224 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 NIT1Q86X76 327 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 K7ESF4 209 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 PRELID3AQ96N28 172 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 FAM186AA6NE01 2351 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 H0Y8G0 127 aa4.16□□□□□ -1.74
PCDH9-201ENST00000377861 AMMECR1LQ6DCA0 310 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms