RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SNAPC3Q92966 411 aa8.98□□□□□ -0.97
SMARCE1-203ENST00000377808 KCTD12Q96CX2 325 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-203ENST00000377808 HSD17B10Q99714 261 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-203ENST00000377808 SLC5A7Q9GZV3 580 aa8.98□□□□□ -0.97
SMARCE1-203ENST00000377808 CCL28Q9NRJ3 127 aa8.98□□□□□ -0.97
SMARCE1-203ENST00000377808 COA4Q9NYJ1 87 aa8.98□□□□□ -0.97
SMARCE1-203ENST00000377808 EHFQ9NZC4 300 aa8.98□□□□□ -0.97
SMARCE1-203ENST00000377808 IGHV4OR15-8A0A075B7B6 117 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 A0A087WW49 117 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 SMIM31A0A1B0GVY4 71 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 MSGN1A6NI15 193 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 FAM25AB3EWG3 89 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 FAM25CB3EWG5 89 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 FAM25GB3EWG6 89 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 K7EIL1 84 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 IGLV2-14P01704 120 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 PMP2P02689 132 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 ECI1P42126 302 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 SSBP2P81877 361 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 DGCR2P98153 550 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 RUNX1Q01196 453 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 DEFA5Q01523 94 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 EGFEM1PQ0D2K5 195 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 CDK10Q15131 360 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 PRSS8Q16651 343 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 ASPHD1Q5U4P2 390 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 GPR107Q5VW38 600 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 ZNF66Q6ZN08 573 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 SSX9Q7RTT3 188 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 SNX29P2Q8IUI4 249 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 VKORC1L1Q8N0U8 176 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 MFSD4AQ8N468 514 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 OR5H2Q8NGV7 314 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 DCUN1D4Q92564 292 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 MRPS26Q9BYN8 205 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 NAA50Q9GZZ1 169 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 SLA2Q9H6Q3 261 aa8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 ZNF430Q9H8G1 570 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 ZMAT5Q9UDW3 170 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-203ENST00000377808 OVOL1O14753 267 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 HPGDSO60760 199 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 LY86O95711 162 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 PRSS3P35030 304 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 KIR2DS2P43631 304 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 RORCP51449 518 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 RNASE12Q5GAN4 147 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 OVCH2Q7RTZ1 564 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 GPR141Q7Z602 305 aa8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 SRSF12Q8WXF0 261 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 ZNF2Q9BSG1 426 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-203ENST00000377808 ANKRD34BA5PLL1 514 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 H3BUA1 57 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 SULT1C2O00338 296 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 SAP30O75446 220 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 OR2A4O95047 310 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 GABARAPO95166 117 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 HSPB1P04792 205 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 HLA-DMAP28067 261 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 RFX2P48378 723 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 TAS2R46P59540 309 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 CATR1Q13166 79 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 C10orf55Q5SWW7 151 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 AADACL3Q5VUY0 350 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 MZT2AQ6P582 158 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 ZNF818PQ6ZRF7 136 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 ANKRD13BQ86YJ7 626 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 MMD2Q8IY49 270 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 SPAG16Q8N0X2 631 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 OR51H1Q8NH63 302 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 VSTM2AQ8TAG5 236 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 AP3S1Q92572 193 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 DLX4Q92988 240 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 RHOVQ96L33 236 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 TMEM68Q96MH6 324 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 OR2A7Q96R45 310 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 PRR25Q96S07 402 aa8.95□□□□□ -0.98
SMARCE1-203ENST00000377808 A0A0G2JLM5 398 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 DPPA5A6NC42 116 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 RAMP3O60896 148 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 KBTBD11O94819 623 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 HRASP01112 189 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 APOA1P02647 267 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 OR9G9P0C7N8 305 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 ELK1P19419 428 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 HRH1P35367 487 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 EIF4EBP1Q13541 118 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 MRGPRG-AS1Q2M3A8 158 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 ZBTB34Q8NCN2 500 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 GIMAP1Q8WWP7 306 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 FYTTD1Q96QD9 318 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 SPIN2AQ99865 258 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 SPIN2BQ9BPZ2 258 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 TINAGL1Q9GZM7 467 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 HRASLSQ9HDD0 168 aa8.94□□□□□ -0.98
SMARCE1-203ENST00000377808 HMX3A6NHT5 357 aa8.93□□□□□ -0.98
SMARCE1-203ENST00000377808 PRH1P02810 166 aa8.93□□□□□ -0.98
SMARCE1-203ENST00000377808 TSPAN5P62079 268 aa8.93□□□□□ -0.98
SMARCE1-203ENST00000377808 DYRK1AQ13627 763 aa8.93□□□□□ -0.98
SMARCE1-203ENST00000377808 MSMO1Q15800 293 aa8.93□□□□□ -0.98
SMARCE1-203ENST00000377808 CTF1Q16619 201 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms