RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 SRSF9Q13242 221 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 MAS1LP35410 378 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 PSMB2P49721 201 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 ZCCHC14Q8WYQ9 949 aaKnown RBP15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 CECR9P0C854 216 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 CEACAM1P13688 526 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 NUBP1P53384 320 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 MRPL14Q6P1L8 145 aaKnown RBP15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 ZNF738Q8NE65 137 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 SMIM8Q96KF7 97 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 IGKV1D-43A0A0B4J1Z2 117 aa15.16■□□□□ 0.02
CNTNAP3-204ENST00000377656 NBASA2RRP1 2371 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 ROS1P08922 2347 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 MDKP21741 143 aaPredicted RBP15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 FAM27E3Q08E93 113 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 TWIST1Q15672 202 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 NRN1LQ496H8 165 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 OR51G1Q8NGK1 321 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 LINC01560Q8TB33 94 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 MEGF10Q96KG7 1140 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 APOBEC3AP31941 199 aaPredicted RBP15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 TNFSF10P50591 281 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 PNKDQ8N490 385 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 ABCA1O95477 2261 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 PUSL1Q8N0Z8 303 aaKnown RBP15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 WNT9BO14905 357 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 ZNF708P17019 499 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 C1QL2Q7Z5L3 287 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 LOC285556D6RIA3 1793 aa15.15■□□□□ 0.02
CNTNAP3-204ENST00000377656 VN1R17PQ8TDU5 208 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 CBY1Q9Y3M2 126 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 AUP1Q9Y679 476 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 FAM106AQ4KMX7 169 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 FOXH1O75593 365 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 AREGP15514 252 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 PDLIM4P50479 330 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 ATP5IP56385 69 aaPredicted RBP15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 ZNF362Q5T0B9 420 aaPredicted RBP15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 VKORC1L1Q8N0U8 176 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 KLK2P20151 261 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 C1orf162Q8NEQ5 155 aaPredicted RBP15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 CDC42EP3Q9UKI2 254 aa15.14■□□□□ 0.01
CNTNAP3-204ENST00000377656 IGLV3-12A0A075B6K2 115 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 ACSF3Q4G176 576 aaPredicted RBP15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 LINC00114Q6XXX2 140 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 ZNF841Q6ZN19 808 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 PAM16Q9Y3D7 125 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 C5orf52A6NGY3 159 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 SMUG1Q53HV7 270 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 C19orf24Q9BVV8 132 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 POLEQ07864 2286 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 ZNF146Q15072 292 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 RSPO4Q2I0M5 234 aaPredicted RBP15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 RNFT1Q5M7Z0 435 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 FADS6Q8N9I5 356 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 POC1AQ8NBT0 407 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 LOC389332A0A1B0GUA5 103 aa15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 TBX6O95947 436 aaPredicted RBP15.13■□□□□ 0.01
CNTNAP3-204ENST00000377656 IFITM10A6NMD0 228 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 TP53RKQ96S44 253 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 A0A0G2JMZ2 1700 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 LRRC37A2A6NM11 1700 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 CGB1A6NKQ9 187 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 C9orf172C9J069 976 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 DIRC3C9JPN6 131 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 REG1AP05451 166 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 SMAGPQ0VAQ4 97 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 NHLRC3Q5JS37 347 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 ACP7Q6ZNF0 438 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 NPIPB3Q92617 1050 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 TMEM106BQ9NUM4 274 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 C12orf77C9JDV5 145 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 HLA-DQA1P01909 254 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 CD81P60033 236 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 RND3P61587 244 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 FXYD3Q14802 87 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 LY6EQ16553 131 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 DDB2Q92466 427 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 TM2D1Q9BX74 207 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 OR51M1Q9H341 326 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 A0A0G2JMM0 328 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 A0A1W2PPB8 328 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 A0A1W2PRS3 328 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 KIR3DP1A8MWS1 328 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 NPIPB11E5RHQ5 1161 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 H0YL77 283 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 GDF9O60383 454 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 CRIPAKQ8N1N5 446 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 SPSB4Q96A44 273 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 PSME4Q14997 1843 aa15.12■□□□□ 0.01
CNTNAP3-204ENST00000377656 ARL14EPLP0DKL9 152 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 LAMTOR1Q6IAA8 161 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 PDCD11Q14690 1871 aaKnown RBP15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 CKS2P33552 79 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 RELBQ01201 579 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 GATAD1Q8WUU5 269 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 ABHD17AQ96GS6 310 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 TBX15Q96SF7 602 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 NABP2Q9BQ15 211 aa15.11■□□□□ 0.01
CNTNAP3-204ENST00000377656 A0A0G2JK05 382 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms