RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 KISS1Q15726 138 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 TSPO2Q5TGU0 170 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 SMIM20Q8N5G0 67 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 OR10V1Q8NGI7 309 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 ANAPC16Q96DE5 110 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 MSI2Q96DH6 328 aaKnown RBP13.1□□□□□ -0.31
FXN-201ENST00000377270 TM2D1Q9BX74 207 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 FREM2Q5SZK8 3169 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
FXN-201ENST00000377270 CELA3BP08861 270 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 ZNF728P0DKX0 622 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 SRD5A2P31213 254 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 RUNX1Q01196 453 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 C1QL2Q7Z5L3 287 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 DTX1Q86Y01 620 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 OR5C1Q8NGR4 320 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 LINC00470Q9BZP3 86 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 YAE1D1Q9NRH1 226 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 LOXL2Q9Y4K0 774 aa13.1□□□□□ -0.31
FXN-201ENST00000377270 M0R135 149 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 CD5LO43866 347 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 IGLV3-1P01715 115 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 RFPL3SP0C7P2 107 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 GLI4P10075 376 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 ACP1P24666 158 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 CD300EQ496F6 205 aaPredicted RBP13.09□□□□□ -0.31
FXN-201ENST00000377270 SSC4DQ8WTU2 575 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 ZNF799Q96GE5 643 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
FXN-201ENST00000377270 LIME1Q9H400 295 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 MCTS1Q9ULC4 181 aaKnown RBP13.09□□□□□ -0.31
FXN-201ENST00000377270 KIAA2026Q5HYC2 2103 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 DHRS3O75911 302 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 C6orf15Q6UXA7 325 aaPredicted RBP13.09□□□□□ -0.31
FXN-201ENST00000377270 TMEM252Q8N6L7 170 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 CT55Q8WUE5 264 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 P2RX4Q99571 388 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 ANXA10Q9UJ72 324 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 PIGLQ9Y2B2 252 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 NTF4P34130 210 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 RPL24P83731 157 aaKnown RBP13.09□□□□□ -0.31
FXN-201ENST00000377270 AESQ08117 197 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 GTF3C1Q12789 2109 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 GABRA6Q16445 453 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 FAM27BQ5VT28 67 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 C19orf24Q9BVV8 132 aa13.09□□□□□ -0.31
FXN-201ENST00000377270 DUXBA0A1W2PPF3 345 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 FAM231BA6NCW3 169 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 IFNA5P01569 189 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 FCGR2AP12318 317 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 DYNLT3P51808 116 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 MRPS34P82930 218 aaKnown RBP13.08□□□□□ -0.32
FXN-201ENST00000377270 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 OR5A2Q8NGI9 324 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 AGMATQ9BSE5 352 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 NPFFR1Q9GZQ6 430 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 CXCL13O43927 109 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 PPOXP50336 477 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
FXN-201ENST00000377270 PHLDA2Q53GA4 152 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 WIPI1Q5MNZ9 446 aaPredicted RBP13.08□□□□□ -0.32
FXN-201ENST00000377270 STUMQ69YW2 141 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 CRIP3Q6Q6R5 217 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 SLC25A40Q8TBP6 338 aa13.08□□□□□ -0.32
FXN-201ENST00000377270 TECTAO75443 2155 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 TEX48A0A1B0GUV7 120 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 HS3ST1O14792 307 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 KBTBD11O94819 623 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 CLDN1O95832 211 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 IGLL1P15814 213 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 GATA2P23769 480 aaPredicted RBP13.07□□□□□ -0.32
FXN-201ENST00000377270 AMTP48728 403 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 RRADP55042 308 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 GGNQ86UU5 652 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 PP6455Q8WZ26 134 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 PIGTQ969N2 578 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 ST6GALNAC6Q969X2 333 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 MYO7BQ6PIF6 2116 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 DNPH1O43598 174 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 CST7O76096 145 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 AGFG2O95081 481 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 WNT2P09544 360 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 RPL32P62910 135 aaKnown RBP13.07□□□□□ -0.32
FXN-201ENST00000377270 ARF1P84077 181 aaKnown RBP13.07□□□□□ -0.32
FXN-201ENST00000377270 ZNF787Q6DD87 383 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 C6orf201Q7Z4U5 140 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 TMEM105Q8N8V8 129 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 HDHD3Q9BSH5 251 aaPredicted RBP13.07□□□□□ -0.32
FXN-201ENST00000377270 DEPPQ9NTK1 212 aa13.07□□□□□ -0.32
FXN-201ENST00000377270 A0A1W2PR80 420 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 PHF1O43189 567 aaPredicted RBP13.06□□□□□ -0.32
FXN-201ENST00000377270 FXYD4P59646 89 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 PPP1CBP62140 327 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 ADIPOQQ15848 244 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 LCN12Q6JVE5 192 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 HARBI1Q96MB7 349 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 ARRDC1-AS1Q9H2J1 176 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms