RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 PRAMEF6Q5VXH4 476 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 CYB5R2Q6BCY4 276 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 OR10V1Q8NGI7 309 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 MEGF10Q96KG7 1140 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 POLDIP2Q9Y2S7 368 aa10.22□□□□□ -0.77
VRK3-202ENST00000377011 A0A1B0GWJ7 208 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 CHST1O43916 411 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 CYB5R3P00387 301 aaPredicted RBP10.21□□□□□ -0.77
VRK3-202ENST00000377011 TGFAP01135 160 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 IFNA5P01569 189 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 CA6P23280 308 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 AKR1C3P42330 323 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 PAX9P55771 341 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 KHDC3LQ587J8 217 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 Q6P435 159 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 HEPN1Q6WQI6 88 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 C1orf174Q8IYL3 243 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 FAM24BQ8N5W8 94 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 PSMG3Q9BT73 122 aaPredicted RBP10.21□□□□□ -0.77
VRK3-202ENST00000377011 GCM1Q9NP62 436 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 GSN-AS1Q9NRJ2 163 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 LIN7CQ9NUP9 197 aaKnown RBP10.21□□□□□ -0.77
VRK3-202ENST00000377011 IL36RNQ9UBH0 155 aa10.21□□□□□ -0.77
VRK3-202ENST00000377011 ZMAT5Q9UDW3 170 aaKnown RBP10.21□□□□□ -0.77
VRK3-202ENST00000377011 RNF212BA8MTL3 300 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 B4DEV8 164 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 FAM90A26D6RGX4 464 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 TGOLN2O43493 480 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 TMEM50AO95807 157 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 SRP19P09132 144 aaKnown RBP10.21□□□□□ -0.78
VRK3-202ENST00000377011 OR13C7P0DN81 318 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 SRSF2Q01130 221 aaKnown RBP10.21□□□□□ -0.78
VRK3-202ENST00000377011 WDR86Q86TI4 376 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 MOGAT3Q86VF5 341 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 ISOC2Q96AB3 205 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 GPR146Q96CH1 333 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 C1orf159Q96HA4 380 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 MAGT1Q9H0U3 335 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 NIT2Q9NQR4 276 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 TMEM106BQ9NUM4 274 aa10.21□□□□□ -0.78
VRK3-202ENST00000377011 SCAF4O95104 1147 aaKnown RBP10.2□□□□□ -0.78
VRK3-202ENST00000377011 TUBG1P23258 451 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 OMGP23515 440 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 ERVK11-1P61568 191 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 MSMO1Q15800 293 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 ZNF497Q6ZNH5 498 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 SLC35E3Q7Z769 313 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 BATF2Q8N1L9 274 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 ZBTB34Q8NCN2 500 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 TUBG2Q9NRH3 451 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 MBNL3Q9NUK0 354 aaKnown RBP10.2□□□□□ -0.78
VRK3-202ENST00000377011 IL19Q9UHD0 177 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 MMP24Q9Y5R2 645 aa10.2□□□□□ -0.78
VRK3-202ENST00000377011 hCG_1809904A0A1W2PP81 198 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 A0A1W2PPE2 198 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 A0A1W2PPE3 182 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 A0A1W2PR64 198 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 A0A1W2PRV1 198 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 TMEM210A6NLX4 147 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 NDUFS6O75380 124 aaKnown RBP10.19□□□□□ -0.78
VRK3-202ENST00000377011 CST7O76096 145 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 AVPP01185 164 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 IGHV2-70P01814 119 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 HOXA5P20719 270 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 ZFP36P26651 326 aaKnown RBP10.19□□□□□ -0.78
VRK3-202ENST00000377011 PMS2P11Q13670 270 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 ICAM4Q14773 271 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 RBMS3Q6XE24 437 aaKnown RBP10.19□□□□□ -0.78
VRK3-202ENST00000377011 C1orf229Q6ZS94 237 aaPredicted RBP10.19□□□□□ -0.78
VRK3-202ENST00000377011 ZNF826PQ6ZT77 177 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 SLC16A13Q7RTY0 426 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 OR13D1Q8NGV5 346 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 TVP23CQ96ET8 276 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 C20orf24Q9BUV8 137 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 UFSP2Q9NUQ7 469 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 PUS1Q9Y606 427 aaKnown RBP eCLIP10.19□□□□□ -0.78
VRK3-202ENST00000377011 H3BQ15 152 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 TMEM178BH3BS89 294 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 HSPB6O14558 160 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 GPR37O15354 613 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 SYNGR2O43760 224 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 ARG1P05089 322 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 NQO2P16083 231 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 UBE2KP61086 200 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 HBG1P69891 147 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 HBG2P69892 147 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 SERF2P84101 59 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 ZNF154Q13106 437 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 ZNF146Q15072 292 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 FAM120AOSQ5T036 256 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 FIP1L1Q6UN15 594 aaKnown RBP10.19□□□□□ -0.78
VRK3-202ENST00000377011 RNASE11Q8TAA1 199 aaKnown RBP10.19□□□□□ -0.78
VRK3-202ENST00000377011 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 MBD3L1Q8WWY6 194 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 RARRES2Q99969 163 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 ZNF665Q9H7R5 613 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 PPP1R3CQ9UQK1 317 aa10.19□□□□□ -0.78
VRK3-202ENST00000377011 LOC102723971A0A1B0GUV8 181 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms