RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 A0A1B0GUT8 65 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 TDGF1P13385 188 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 NPPCP23582 126 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 NPIPB4C9JG80 1138 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 MPZL1O95297 269 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 NKG7Q16617 165 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
VPS13A-205ENST00000376636 TCRBV5S1A1TA0A578 114 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 CDC42EP2O14613 210 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 CEACAM21Q3KPI0 293 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 CENPWQ5EE01 88 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 SDF2L1Q9HCN8 221 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 DANCRP0C864 163 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 CD300CQ08708 224 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 ORMDL3Q8N138 153 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 HILPDAQ9Y5L2 63 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 PARP14Q460N5 1801 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 QSER1Q2KHR3 1735 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 ODAMA1E959 279 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 EFNB2P52799 333 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 PRSS12P56730 875 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 TNFRSF9Q07011 255 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 THY1P04216 161 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 CTSSP25774 331 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 FBXW9Q5XUX1 488 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 MEGF9Q9H1U4 602 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 KLK13Q9UKR3 277 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 ORAOV1Q8WV07 137 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 PAX1P15863 534 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 C14orf144Q96I85 54 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 RBM38Q9H0Z9 239 aaKnown RBP10.06□□□□□ -0.8
VPS13A-205ENST00000376636 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 ZNF205O95201 554 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 MDKP21741 143 aaPredicted RBP10.06□□□□□ -0.8
VPS13A-205ENST00000376636 TIMM23BQ5SRD1 257 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 WNT10AQ9GZT5 417 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 ZNF658BQ4V348 819 aaPredicted RBP10.06□□□□□ -0.8
VPS13A-205ENST00000376636 ZNF488Q96MN9 340 aa10.06□□□□□ -0.8
VPS13A-205ENST00000376636 NMBP08949 121 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 A8MWV9 139 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 PEX7O00628 323 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 IFI27P40305 119 aaPredicted RBP10.05□□□□□ -0.8
VPS13A-205ENST00000376636 SLC25A53Q5H9E4 307 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 TNFRSF12AQ9NP84 129 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 SIGLEC1Q9BZZ2 1709 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 ISG15P05161 165 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 SOX8P57073 446 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FGF12P61328 243 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 MIC13Q5XKP0 118 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 ST6GALNAC2Q9UJ37 374 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 ABCA4P78363 2273 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 PF4P02776 101 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 PIMREGQ9BSJ6 248 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 MPTX1A8MV57 137 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 IGLV3-25P01717 112 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 CBLN1P23435 193 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 DCTN5Q9BTE1 182 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 ZNF257Q9Y2Q1 563 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 PLXNA1Q9UIW2 1896 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A10PA6NDY2 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A18PA6NE21 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A16PA6NEW6 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A20PA6NIJ5 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A8PA6NJQ4 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A7PA6NKC0 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A22PA8MWA6 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A12PA8MX19 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A5PA8MXJ8 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A23PA8MXZ1 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 MGST3O14880 152 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 NDUFA3O95167 84 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A15PP0C7V4 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A13PP0C7W8 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A14PP0C7W9 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 FAM90A24PP0C7X0 464 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 HIKESHIQ53FT3 197 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 Q6ZNB5 142 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
VPS13A-205ENST00000376636 LHFPL4Q7Z7J7 247 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
VPS13A-205ENST00000376636 C1QTNF12Q5T7M4 302 aa10.05□□□□□ -0.8
VPS13A-205ENST00000376636 RSPO2Q6UXX9 243 aaPredicted RBP10.05□□□□□ -0.8
VPS13A-205ENST00000376636 BCORQ6W2J9 1755 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 NAPSAO96009 420 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 CRYBB3P26998 211 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 RPL34P49207 117 aaKnown RBP10.04□□□□□ -0.8
VPS13A-205ENST00000376636 HCP5Q6MZN7 132 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms