RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 COX5AP20674 150 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 SSTR5P35346 364 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 CASP6P55212 293 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 ZNF645Q8N7E2 425 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 PARD6GQ9BYG4 376 aaPredicted RBP12.65□□□□□ -0.38
MSH5-203ENST00000375750 MBNL3Q9NUK0 354 aaKnown RBP12.65□□□□□ -0.38
MSH5-203ENST00000375750 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.382e-20■□□□□ 10.6
MSH5-203ENST00000375750 HBZP02008 142 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 P0C879 139 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 THBS3P49746 956 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 FOXC1Q12948 553 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 LINC01551Q86U37 167 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 RTL8AQ9BWD3 113 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 QTRT1Q9BXR0 403 aaKnown RBP12.65□□□□□ -0.38
MSH5-203ENST00000375750 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.65□□□□□ -0.38
MSH5-203ENST00000375750 FZR1Q9UM11 496 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 ATMQ13315 3056 aa12.65□□□□□ -0.38
MSH5-203ENST00000375750 SH2D1BO14796 132 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 HAND1O96004 215 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 WNT2P09544 360 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 CDC34P49427 236 aaPredicted RBP12.64□□□□□ -0.39
MSH5-203ENST00000375750 PDLIM4P50479 330 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 GCNT2Q8N0V5 402 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 Q8N7P7 452 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 ZNF709Q8N972 641 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 TAAR6Q96RI8 345 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 GP6Q9HCN6 339 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 IGHG3P01860 377 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 CNN1P51911 297 aaKnown RBP12.64□□□□□ -0.39
MSH5-203ENST00000375750 ZNF124Q15973 351 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 GBGT1Q8N5D6 347 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 TMEM18Q96B42 140 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 ACY3Q96HD9 319 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 IMMP2LQ96T52 175 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 WIPI2Q9Y4P8 454 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 TRAPPC1Q9Y5R8 145 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 TRBV20OR9-2A0A075B6H5 130 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 K7EM74 188 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 GCGP01275 180 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 FRMD6-AS1P0C7T7 363 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 MOB1BQ7L9L4 216 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 H2BFWTQ7Z2G1 175 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 GALMQ96C23 342 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 ANAPC16Q96DE5 110 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 NOL4LQ96MY1 436 aaPredicted RBP12.64□□□□□ -0.39
MSH5-203ENST00000375750 TRIB1Q96RU8 372 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 MANBALQ9NQG1 85 aa12.64□□□□□ -0.39
MSH5-203ENST00000375750 FAM90A26D6RGX4 464 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 RAC2P15153 192 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 MPV17P39210 176 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 RPL15P61313 204 aaKnown RBP12.63□□□□□ -0.39
MSH5-203ENST00000375750 TDRG1Q3Y452 100 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 SLC25A40Q8TBP6 338 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 BCL2L2Q92843 193 aaPredicted RBP12.63□□□□□ -0.39
MSH5-203ENST00000375750 C15orf62A8K5M9 175 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 OR9G9P0C7N8 305 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 GABRA2P47869 451 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 PPP1CBP62140 327 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 EIF4EBP1Q13541 118 aaPredicted RBP12.63□□□□□ -0.39
MSH5-203ENST00000375750 MSMO1Q15800 293 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 ZADH2Q8N4Q0 377 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 COQ2Q96H96 371 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 KCNIP1Q9NZI2 227 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 PSG11Q9UQ72 335 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 TP53TG5Q9Y2B4 290 aa12.63□□□□□ -0.39
MSH5-203ENST00000375750 POLR3KQ9Y2Y1 108 aaPredicted RBP12.63□□□□□ -0.39
MSH5-203ENST00000375750 PRAMEF6Q5VXH4 476 aa12.62□□□□□ -0.39
MSH5-203ENST00000375750 FKBP11Q9NYL4 201 aa12.62□□□□□ -0.39
MSH5-203ENST00000375750 RNF212BA8MTL3 300 aa12.62□□□□□ -0.39
MSH5-203ENST00000375750 MLNRO43193 412 aa12.62□□□□□ -0.39
MSH5-203ENST00000375750 SMPD2O60906 423 aa12.62□□□□□ -0.39
MSH5-203ENST00000375750 PSG7Q13046 419 aa12.62□□□□□ -0.39
MSH5-203ENST00000375750 CISD2Q8N5K1 135 aaKnown RBP12.62□□□□□ -0.39
MSH5-203ENST00000375750 SGMS2Q8NHU3 365 aa12.62□□□□□ -0.39
MSH5-203ENST00000375750 RRHO14718 337 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 LYZL6O75951 148 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 ADMP35318 185 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 NUTF2P61970 127 aaKnown RBP12.61□□□□□ -0.39
MSH5-203ENST00000375750 ZNF146Q15072 292 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 OR13A1Q8NGR1 328 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 NEU1Q99519 415 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 MRPL37Q9BZE1 423 aaKnown RBP12.61□□□□□ -0.39
MSH5-203ENST00000375750 OBP2BQ9NPH6 170 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 SRP14P37108 136 aaKnown RBP12.61□□□□□ -0.39
MSH5-203ENST00000375750 FBXW9Q5XUX1 488 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 SCNM1Q9BWG6 230 aa12.61□□□□□ -0.39
MSH5-203ENST00000375750 SVILO95425 2214 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 SCO2A0A1W2PP80 73 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 TMEM30CPA0ZSE6 113 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 ZNF705FA8MVS1 300 aaPredicted RBP12.6□□□□□ -0.39
MSH5-203ENST00000375750 SLC17A3O00476 420 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 AQP7O14520 342 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 AGFG2O95081 481 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 MBP02144 154 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 TYMSP04818 313 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 ZNF705DP0CH99 300 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms