RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 FAM234AQ9H0X4 552 aa12.09□□□□□ -0.47
MSH5-201ENST00000375703 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
MSH5-201ENST00000375703 PDE6DO43924 150 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 SRP14P37108 136 aaKnown RBP12.08□□□□□ -0.48
MSH5-201ENST00000375703 MBNL2Q5VZF2 373 aaKnown RBP12.08□□□□□ -0.48
MSH5-201ENST00000375703 FDCSPQ8NFU4 85 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 IGHV2OR16-5A0A0B4J2B6 119 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 M0R1X1 148 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 AMBPP02760 352 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 EGR1P18146 543 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 BMP5P22003 454 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 CHRNA7P36544 502 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 PKIAP61925 76 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 MZT1Q08AG7 82 aa12.08□□□□□ -0.48
MSH5-201ENST00000375703 PATZ1Q9HBE1 687 aaKnown RBP12.08□□□□□ -0.48
MSH5-201ENST00000375703 IGHV1-18A0A0C4DH31 117 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 M0R296 226 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 DVL1O14640 695 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 GGCTO75223 188 aaKnown RBP12.07□□□□□ -0.48
MSH5-201ENST00000375703 IGHV3-13P01766 116 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 CD82P27701 267 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 GNB1P62873 340 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 PAX5Q02548 391 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 P2RY6Q15077 328 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 VKORC1L1Q8N0U8 176 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 TMEM170AQ8WVE7 144 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 RHOVQ96L33 236 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 PLSCR4Q9NRQ2 329 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 IGKV1D-17A0A075B6S4 117 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 RRHO14718 337 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 NDUFB4O95168 129 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 IGLV1-44P01699 117 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 ATP5G3P48201 142 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 AARDQ4LEZ3 155 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 COA6Q5JTJ3 125 aaKnown RBP12.07□□□□□ -0.48
MSH5-201ENST00000375703 KCNIP4Q6PIL6 250 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 RAB1CQ92928 201 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 ACY3Q96HD9 319 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 PRO1933Q9H354 126 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 AURKAIP1Q9NWT8 199 aaPredicted RBP12.07□□□□□ -0.48
MSH5-201ENST00000375703 JPT1Q9UK76 154 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 FUT9Q9Y231 359 aa12.07□□□□□ -0.48
MSH5-201ENST00000375703 AQP7O14520 342 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 SOX15O60248 233 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 YPEL1O60688 119 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 MPDU1O75352 247 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 NUBP1P53384 320 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 ERVK-16P61578 105 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 JOSD1Q15040 202 aaPredicted RBP12.06□□□□□ -0.48
MSH5-201ENST00000375703 TMEM249Q2WGJ8 235 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 RPL39P5Q59GN2 51 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 TREML4Q6UXN2 200 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 LINC01551Q86U37 167 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 DMRTC2Q8IXT2 367 aaPredicted RBP12.06□□□□□ -0.48
MSH5-201ENST00000375703 CISD2Q8N5K1 135 aaKnown RBP12.06□□□□□ -0.48
MSH5-201ENST00000375703 OR5R1Q8NH85 324 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 RNASEH2CQ8TDP1 164 aaKnown RBP12.06□□□□□ -0.48
MSH5-201ENST00000375703 SARAFQ96BY9 339 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 DUSP13Q9UII6 198 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 A0A1B0GV90 55 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 PRR33A8MZF0 331 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 TSTD3H0UI37 97 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 PDLIM3Q53GG5 364 aaPredicted RBP12.06□□□□□ -0.48
MSH5-201ENST00000375703 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 PPP1R35Q8TAP8 253 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 SDSLQ96GA7 329 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 S1PR3Q99500 378 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 KCNIP2Q9NS61 270 aa12.06□□□□□ -0.48
MSH5-201ENST00000375703 SRRM5B3KS81 715 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 MGST3O14880 152 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 OPRK1P41145 380 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 ZNF134P52741 427 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 SRSF6Q13247 344 aaKnown RBP12.05□□□□□ -0.48
MSH5-201ENST00000375703 ACTL10Q5JWF8 245 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 FAM90A1Q86YD7 464 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 Q8TCH9 128 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 C14orf144Q96I85 54 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 OPN3Q9H1Y3 402 aaPredicted RBP12.05□□□□□ -0.48
MSH5-201ENST00000375703 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 TRAV3A0A0B4J244 114 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 A0A1B0GWJ7 208 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
MSH5-201ENST00000375703 TYMSP04818 313 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 VDAC2P45880 294 aaPredicted RBP12.05□□□□□ -0.48
MSH5-201ENST00000375703 FAM78BQ5VT40 261 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 C1orf174Q8IYL3 243 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 MEGF10Q96KG7 1140 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 DERL1Q9BUN8 251 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 MS4A5Q9H3V2 200 aa12.05□□□□□ -0.48
MSH5-201ENST00000375703 ZNF71Q9NQZ8 489 aaPredicted RBP12.05□□□□□ -0.48
MSH5-201ENST00000375703 F6UZH7 168 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 TMPRSS2O15393 492 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 GZMBP10144 247 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 RELBQ01201 579 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 TRIP6Q15654 476 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms