RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IAPPP10997 89 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 SLC25A6P12236 298 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 MSR1P21757 451 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 PRRX1P54821 245 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 CLDN15P56746 228 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 ZIC4Q8N9L1 334 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 ABHD3Q8WU67 409 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 ZNF837Q96EG3 531 aaPredicted RBP10.25□□□□□ -0.77
C9orf3-203ENST00000375315 PRRG4Q9BZD6 226 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 NCKAP5O14513 1909 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 COL27A1Q8IZC6 1860 aaPredicted RBP10.25□□□□□ -0.77
C9orf3-203ENST00000375315 EXPH5Q8NEV8 1989 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 PTPRQQ9UMZ3 2332 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 LOC102724200A0A096LPH7 203 aaPredicted RBP10.25□□□□□ -0.77
C9orf3-203ENST00000375315 F2Z2F3 143 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 PMCHP20382 165 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 S100GP29377 79 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 MEOX1P50221 254 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 MALLQ13021 153 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 STUMQ69YW2 141 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 TMEM211Q6ICI0 200 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 ZNF818PQ6ZRF7 136 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 DTX1Q86Y01 620 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 ZNF295-AS1Q8N0V1 137 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 OR10V1Q8NGI7 309 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 OR10G9Q8NGN4 311 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 OR10G8Q8NGN5 311 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 OR10G7Q8NGN6 311 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 SPSB1Q96BD6 273 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 WNT10AQ9GZT5 417 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 CHODLQ9H9P2 273 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 LOC102725191A0A1B0GVB3 256 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 H0Y980 276 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 SPRY1O43609 319 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-203ENST00000375315 APOBEC3AP31941 199 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-203ENST00000375315 RNPS1Q15287 305 aaKnown RBP10.24□□□□□ -0.77
C9orf3-203ENST00000375315 OR10D3Q8NH80 312 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 C10orf35Q96D05 121 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 KCNS1Q96KK3 526 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 C17orf112F2Z3M2 114 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 GFRA3O60609 400 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 NPPCP23582 126 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 C19orf35Q6ZS72 473 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 MUC15Q8N387 334 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 BORCS7Q96B45 105 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 ZNF442Q9H7R0 627 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 PNRC2Q9NPJ4 139 aaKnown RBP10.24□□□□□ -0.77
C9orf3-203ENST00000375315 KIAA1324LA8MWY0 1029 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-203ENST00000375315 S1PR2O95136 353 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 REG1AP05451 166 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 C3orf79P0CE67 100 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 TMEM251Q8N6I4 163 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 UHRF2Q96PU4 802 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 GPHA2Q96T91 129 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 TTTY12Q9BZ98 90 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 GNB4Q9HAV0 340 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 BOKQ9UMX3 212 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-203ENST00000375315 ROS1P08922 2347 aa10.24□□□□□ -0.77
C9orf3-203ENST00000375315 SAA2-SAA4A0A096LPE2 208 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 TRBV9A0A0B4J1U6 114 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 SNURFLB1AK76 121 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 E9PLN8 166 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 DEGS1O15121 323 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 IGLV3-1P01715 115 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 IGHG1P01857 330 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 SLC38A11Q08AI6 406 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 ACSM6Q6P461 480 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 HAPLN4Q86UW8 402 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 MRPL13Q9BYD1 178 aaKnown RBP10.23□□□□□ -0.77
C9orf3-203ENST00000375315 COL5A1P20908 1838 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-203ENST00000375315 C5orf63A6NC05 138 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 CD300LBA8K4G0 201 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 PDCD6O75340 191 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 SERPINE2P07093 398 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 CYC1P08574 325 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 COX5AP20674 150 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 RIPPLY3P57055 190 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 SMIM21Q3B7S5 101 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 OR10J3Q5JRS4 329 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 RNFT1Q5M7Z0 435 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 PHYHD1Q5SRE7 291 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 OSR2Q8N2R0 312 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 OR52L2PQ8NGH6 319 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 SCNM1Q9BWG6 230 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 ICE1Q9Y2F5 2266 aa10.23□□□□□ -0.77
C9orf3-203ENST00000375315 F5H5K5 113 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 NDUFB4O95168 129 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 SRD5A2P31213 254 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 IER3P46695 156 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 GNB1P62873 340 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 PIGYQ3MUY2 71 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 ERASQ7Z444 233 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 FAM173AQ9BQD7 235 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 SH2D2AQ9NP31 389 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 IL36BQ9NZH7 164 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 A0A0G2JRQ6 117 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 CORTO00230 105 aa10.22□□□□□ -0.77
C9orf3-203ENST00000375315 RBFOX2O43251 390 aaKnown RBP eCLIP10.22□□□□□ -0.771e-7■■■■□ 20.5
C9orf3-203ENST00000375315 ZNF324O75467 553 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms