RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 SIGLEC9Q9Y336 463 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 RNF114Q9Y508 228 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 LINC00854A0A1B0GVQ3 168 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 KCNAB3O43448 404 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 UPK1BO75841 260 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 HRASP01112 189 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 SAA1P0DJI8 122 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-201ENST00000374673 BTCP35070 178 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 VDAC2P45880 294 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-201ENST00000374673 PROK1P58294 105 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 TAS2R31P59538 309 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 PLGLAQ15195 96 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 RBMS2Q15434 407 aaKnown RBP11.88□□□□□ -0.51
HSPG2-201ENST00000374673 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 ARSJQ5FYB0 599 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-201ENST00000374673 SLC35E3Q7Z769 313 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 HSPB9Q9BQS6 159 aa11.88□□□□□ -0.51
HSPG2-201ENST00000374673 FBN1P35555 2871 aaKnown RBP11.87□□□□□ -0.51
HSPG2-201ENST00000374673 IGHV7-81A0A0B4J1V7 117 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 H0Y980 276 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 LYRM1O43325 122 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 B3GALNT1O75752 331 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 S1PR2O95136 353 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 NQO2P16083 231 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 PUSL1Q8N0Z8 303 aaKnown RBP11.87□□□□□ -0.51
HSPG2-201ENST00000374673 VSTM2AQ8TAG5 236 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 RHOVQ96L33 236 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 AIFM2Q9BRQ8 373 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 WNT10AQ9GZT5 417 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 TPSG1Q9NRR2 321 aa11.87□□□□□ -0.51
HSPG2-201ENST00000374673 ATRQ13535 2644 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 C3orf85A0A1B0GTC6 90 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 CRYM-AS1A6NIL9 109 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 NDUFB6O95139 128 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 LPAR6P43657 344 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 CCR6P51684 374 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 C12orf54Q6X4T0 127 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 FOXRED2Q8IWF2 684 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 TMEM230Q96A57 120 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 OR51J1Q9H342 316 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 NAA60Q9H7X0 242 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
HSPG2-201ENST00000374673 TEX13DA0A0J9YY54 714 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-201ENST00000374673 LINC01548A6NM66 108 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 AP4M1O00189 453 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 FCN1O00602 326 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 CREBL2O60519 120 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-201ENST00000374673 KBTBD11O94819 623 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 OR2A4O95047 310 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 CA2P00918 260 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 RPA2P15927 270 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 UCP1P25874 307 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 CX3CL1P78423 397 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 IFITM3Q01628 133 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 ASAH1Q13510 395 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 MRGPRG-AS1Q2M3A8 158 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 CADM3Q8N126 398 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 ADAD2Q8NCV1 583 aaKnown RBP11.85□□□□□ -0.51
HSPG2-201ENST00000374673 TMEM167AQ8TBQ9 72 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 WIPF2Q8TF74 440 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-201ENST00000374673 WFDC12Q8WWY7 111 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 R3HDM4Q96D70 268 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 OR2A7Q96R45 310 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 CLCC1Q96S66 551 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 BET1LQ9NYM9 111 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 TBC1D24Q9ULP9 559 aa11.85□□□□□ -0.51
HSPG2-201ENST00000374673 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 HAX1O00165 279 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 IGF1P05019 195 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 IL6RP08887 468 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-201ENST00000374673 OR5AC1P0C628 307 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 CRIP2P52943 208 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-201ENST00000374673 SSBP2P81877 361 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-201ENST00000374673 NDPQ00604 133 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 PRSS8Q16651 343 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 OR4A47Q6IF82 309 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 SGPP2Q8IWX5 399 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 MMD2Q8IY49 270 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 STPG2Q8N412 459 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 KLHDC1Q8N7A1 406 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 OR4A5Q8NH83 315 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 CHPT1Q8WUD6 406 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 GALNT14Q96FL9 552 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 PLXNB1O43157 2135 aa11.84□□□□□ -0.51
HSPG2-201ENST00000374673 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
HSPG2-201ENST00000374673 ATP6V0E1O15342 81 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 SERPINE2P07093 398 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 AKR1C4P17516 323 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 SLC6A1P30531 599 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 ERVK-16P61578 105 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms